DRSC/TRiP Functional Genomics Resources

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Protein Alignment st and ABCG6

DIOPT Version :9

Sequence 1:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_196862.1 Gene:ABCG6 / 831202 AraportID:AT5G13580 Length:727 Species:Arabidopsis thaliana


Alignment Length:707 Identity:190/707 - (26%)
Similarity:318/707 - (44%) Gaps:80/707 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 KRIDVEAPERVEQHELQVMPVGSTIEVP------SLDSTPKLSKRNSSERSLPLRSYSKWSPTEQ 65
            :.:|........||.:.|........||      .|..:.|:.::.:..||:   |....:|:| 
plant    38 QNVDDSTRRSHHQHHVDVDLASPDQSVPFVLSFTDLTYSVKVRRKFTWRRSV---SSDPGAPSE- 98

  Fly    66 GATLVWRDLCVYTNVGGSGQRMKRIINNSTGAIQPGTLMALMGSSGSGKTTLMSTLAFRQPAGTV 130
                           |....:.|.::|..||..:.|.::|::|:|||||:||:..||.|...|: 
plant    99 ---------------GIFSSKTKTLLNGITGEARDGEILAVLGASGSGKSTLIDALANRIAKGS- 147

  Fly   131 VQGDILINGRRIGPFMHR-ISGYVYQDDLFLGSLTVLEHLNFMAHLRLDRRVSKEERRLIIKELL 194
            ::|::.:||..:...|.: ||.||.||||....|||.|.|.|.|..||.|.:||.::.|.::.|:
plant   148 LKGNVTLNGEVLNSKMQKAISAYVMQDDLLFPMLTVEETLMFAAEFRLPRSLSKSKKSLRVQALI 212

  Fly   195 ERTGLLSAAQTRIGSGDDKKVLSGGERKRLAFAVELLNNPVILFCDEPTTGLDSYSAQQLVATLY 259
            ::.||.:||.|.||. :..:.:|||||:|::..::::::|::||.||||:||||.||..::..|.
plant   213 DQLGLRNAANTVIGD-EGHRGISGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSALSVIKVLK 276

  Fly   260 ELAQKGTTILCTIHQPSSQLFDNFNNVMLLADGRVAFTGSPQHALSFFANHGYYCPEAYNPADFL 324
            .:||.|:.::.|:||||.:|....:.::.|:.|:..|:|||.....|||..|:..||..|..:|.
plant   277 RIAQSGSMVIMTLHQPSYRLLRLLDRLLFLSRGQTVFSGSPAMLPRFFAEFGHPIPEHENRTEFA 341

  Fly   325 IGVLAT--------------DPGYEQ--ASQRSAQHLCDQFAVSSAAKQRDMLVNLEIHMAQSGN 373
            :.::..              :.|:.|  |..||...|..:.|:|::..:..::.........||:
plant   342 LDLIRELEGSAGGTRSLVEFNKGFRQRKAEPRSQTGLSLKEAISASISKGKLVSGATTTTHSSGS 406

  Fly   374 FPFDTEVESFRGVAWYKRFHVVWLRASLTLLRDPTIQWLRFIQKIAMAFIIGACFAGTTEPSQLG 438
            .|..| :.:|....|.: ..|:..|:.....|.|.:..:|....:...||:...| ...:.|..|
plant   407 SPVST-IPTFANPFWVE-LAVLAKRSMTNSRRQPELFGIRLGAVLVTGFILATMF-WQLDNSPKG 468

  Fly   439 VQAVQGALFIMISENTYHPMYSVLNLFPQGFPLFMRETRSGLYSTGQYYAANILALLPGMIIEPL 503
            ||...|. |......|::.....|.:|.|...:|||||....|....|..::.|..||.:||..|
plant   469 VQERLGC-FAFAMSTTFYTCADALPVFLQERFIFMRETAYNAYRRSSYVLSHSLVALPSLIILSL 532

  Fly   504 IFVIICYWLTGLRSTFYAFGVTAMCVVLVMNVATACGCFFSTAFNSVPLAMAYLVPLDYIFMITS 568
            .|..|.:|..||......|....:.::......::...|.|.....|.|....:|.:...|::.|
plant   533 AFAAITFWGVGLDGGLMGFLFYFLVILASFWAGSSFVTFLSGVVPHVMLGYTIVVAILAYFLLFS 597

  Fly   569 GIFIQVNSLPVAFW-WTQFLSWMLYANEAMTAAQWSG-----VQNITCFQES------------- 614
            |.||..:.:| .:| |..::|.:.|..||:...::..     |:.:..|..:             
plant   598 GFFINRDRIP-GYWIWFHYISLVKYPYEAVLLNEFGDPTKCFVRGVQIFDNTPLVAVPQGMKVRL 661

  Fly   615 ------------ADLPCFHTGQDVLDKYSFNESNVYRNLLAMVGLYFGFHLLGYYCL 659
                        ....|..||.|:|.:....:...:..|...|...|.|.:|.|:.|
plant   662 LATMSKSLGMRITSSTCLTTGYDILQQQGVTDLTKWNCLWVTVAWGFFFRILFYFSL 718

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stNP_524108.1 ABCG_EPDR 66..298 CDD:213180 84/232 (36%)
3a01204 67..665 CDD:273361 177/641 (28%)
ABC2_membrane 395..600 CDD:279410 53/205 (26%)
ABCG6NP_196862.1 3a01204 105..726 CDD:273361 176/621 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.880

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