DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment st and ABCG22

DIOPT Version :9

Sequence 1:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_568169.1 Gene:ABCG22 / 830541 AraportID:AT5G06530 Length:751 Species:Arabidopsis thaliana


Alignment Length:687 Identity:181/687 - (26%)
Similarity:317/687 - (46%) Gaps:102/687 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 PERVEQHELQVMPVGSTIEVPSLDSTPKLSKRNSSERSLPLRSYSKWSPTEQGATLVWRDL---C 75
            ||.:...:    |......:|......|...:..:|.:||:             .|.:||:   .
plant   119 PEEISDSK----PFSDDEMIPEDIEAGKKKPKFQAEPTLPI-------------FLKFRDVTYKV 166

  Fly    76 VYTNVGGSGQRMKRIINNSTGAIQPGTLMALMGSSGSGKTTLMSTLAFRQPAGTVVQ----GDIL 136
            |...:..|.:  |.|:...:|::.||.::||||.||||||||:|.|     ||.:.|    |.:.
plant   167 VIKKLTSSVE--KEILTGISGSVNPGEVLALMGPSGSGKTTLLSLL-----AGRISQSSTGGSVT 224

  Fly   137 INGRRIGPFMHRISGYVYQDDLFLGSLTVLEHLNFMAHLRLDRRVSKEERRLIIKELLERTGLLS 201
            .|.:....::....|:|.|||:....|||.|.|.:.|.|||.:.:::|:::....::::..||..
plant   225 YNDKPYSKYLKSKIGFVTQDDVLFPHLTVKETLTYAARLRLPKTLTREQKKQRALDVIQELGLER 289

  Fly   202 AAQTRIGSGDDKKVLSGGERKRLAFAVELLNNPVILFCDEPTTGLDSYSAQQLVATLYELAQKGT 266
            ...|.|| |...:.:|||||||::...|::.||.:|..||||:||||.:|.:.:..|:::|:.|.
plant   290 CQDTMIG-GAFVRGVSGGERKRVSIGNEIIINPSLLLLDEPTSGLDSTTALRTILMLHDIAEAGK 353

  Fly   267 TILCTIHQPSSQLFDNFNNVMLLADGRVAFTGSPQHALSFFANHGYYCPEAYNPADFLIG----- 326
            |::.|||||||:||..|:.::||..|.:.:.|....||.:|::.|.....|.|||:||:.     
plant   354 TVITTIHQPSSRLFHRFDKLILLGRGSLLYFGKSSEALDYFSSIGCSPLIAMNPAEFLLDLANGN 418

  Fly   327 -------------VLATDPGYEQASQRSA-----QHLCDQFAVSSAAKQRDMLVNLEIHMAQSGN 373
                         |...:.|.|..:.:.:     ::|.:.:....|.:::..|::         .
plant   419 INDISVPSELDDRVQVGNSGRETQTGKPSPAAVHEYLVEAYETRVAEQEKKKLLD---------P 474

  Fly   374 FPFDTE--VESFR-----GVAWYKRFHVVWLRASLTLLRDPTIQWLRFIQKIAMAFIIGACFAGT 431
            .|.|.|  .:|.|     |..|::::.:::.| .|...|.....|||..|.::.|.|:|..:..:
plant   475 VPLDEEAKAKSTRLKRQWGTCWWEQYCILFCR-GLKERRHEYFSWLRVTQVLSTAVILGLLWWQS 538

  Fly   432 TEPSQLGVQAVQGALFIMISENTYHPMYSVLNLFPQGFPLFMRETRSGLYSTGQYYAANILALLP 496
            ...:.:|:|...|.||.:.....:.|:::.:..|||...:..:|..:.:|....|:.|...:.||
plant   539 DIRTPMGLQDQAGLLFFIAVFWGFFPVFTAIFAFPQERAMLNKERAADMYRLSAYFLARTTSDLP 603

  Fly   497 GMIIEPLIFVIICYWLTGLRSTFYAFGVTA----MCVVLVMNVATACGCFFSTAFNSVPLAMAYL 557
            ...|.|.:|:::.|::||||.:.|.|.::.    :|::....:..|.|........:..||...:
plant   604 LDFILPSLFLLVVYFMTGLRISPYPFFLSMLTVFLCIIAAQGLGLAIGAILMDLKKATTLASVTV 668

  Fly   558 VPLDYIFMITSGIFIQVNSLPVAFWWTQFLSWMLYANEAMTAAQWSGVQNITCFQESADLPCFHT 622
            :    .||:..|.|  |..:||...|.::||:..:..:.:...|:.            |......
plant   669 M----TFMLAGGFF--VKKVPVFISWIRYLSFNYHTYKLLLKVQYQ------------DFAVSIN 715

  Fly   623 GQDVLDKYSFNESNVYRNLLAMVGLYFGFHLLGYYCL 659
            |..:        .|....:.|:|.:.||:.||.|..|
plant   716 GMRI--------DNGLTEVAALVVMIFGYRLLAYLSL 744

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stNP_524108.1 ABCG_EPDR 66..298 CDD:213180 87/238 (37%)
3a01204 67..665 CDD:273361 173/634 (27%)
ABC2_membrane 395..600 CDD:279410 50/208 (24%)
ABCG22NP_568169.1 PLN03211 112..748 CDD:215634 181/687 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 1 1.000 - - otm2959
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.820

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