DRSC/TRiP Functional Genomics Resources

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Protein Alignment st and ABCG42

DIOPT Version :10

Sequence 1:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_001319945.1 Gene:ABCG42 / 827188 AraportID:AT4G15233 Length:1392 Species:Arabidopsis thaliana


Alignment Length:647 Identity:173/647 - (26%)
Similarity:298/647 - (46%) Gaps:103/647 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 SSERSLPLRSYSKWSPTEQGATLVWRDLCVYTNVGGSGQRMKRIINNSTGAIQPGTLMALMGSSG 111
            |||....:.|..|.:...:..|..::|: .|......|::: ::::..|||.:||.|.||||.||
plant   778 SSENDSKIASRFKNALPFEPLTFTFQDV-QYIIETPQGKKL-QLLSGVTGAFKPGVLTALMGVSG 840

  Fly   112 SGKTTLMSTLAFRQPAGTVVQGDILINGR-RIGPFMHRISGYVYQDDLFLGSLTVLEHLNFMAHL 175
            :|||||:..|:.|:..|. ::|.|.:.|. ::.....|:|||..|.|:...:|||.|.|.:.|.|
plant   841 AGKTTLLDVLSGRKTFGD-IKGQIEVGGYVKVQDTFSRVSGYCEQFDIHSPNLTVQESLKYSAWL 904

  Fly   176 RLDRRVSKEERRLIIKELLERTGLLSAAQTRIG----SGDDKKVLSGGERKRLAFAVELLNNPVI 236
            ||...:|.|.:..|:.|:||...|.....:.:|    ||     |:..:||||..||||::||.|
plant   905 RLTSNISSETKCAIVNEVLETIELEEIKDSIVGIPGISG-----LTTEQRKRLTIAVELVSNPSI 964

  Fly   237 LFCDEPTTGLDSYSAQQLVATLYELAQKGTTILCTIHQPSSQLFDNFNNVMLLAD-GRVAFTGS- 299
            :|.||||||||:.:|..::..:..:|:.|.|::|||||||..:|:.|:.::|:.: |::.:.|. 
plant   965 IFMDEPTTGLDARAAAIVMRAVKNIAETGRTVVCTIHQPSIDIFEAFDELILMKNGGKIIYYGPL 1029

  Fly   300 PQHA---LSFFAN-HGY-YCPEAYNPADFLIGVLATDPGYEQASQRSAQHLCDQFAVSSAAKQRD 359
            .||:   :.:|.. ||. ...|..|||.:::.:.:     :.:..:....|...:..|:..|:..
plant  1030 GQHSSKVIEYFMRIHGVPKLKENSNPATWILDITS-----KSSEDKLGVDLAQMYEESTLFKENK 1089

  Fly   360 MLVN-------------LEIHMAQSGNFPFDTEVESFRGVAWYKRFHVVWLRASLTLLRDPTIQW 411
            |::.             |....||       |..|.|:...|         :..|:..|:|:...
plant  1090 MVIEQTRCTSLGSERLILSSRYAQ-------TSWEQFKACLW---------KQHLSYWRNPSYNL 1138

  Fly   412 LRFIQKIAMAFIIGACFAGTTEP--SQLGVQAVQGALFIMISENTYHPMYSVLNLFPQGFPLFMR 474
            .|.|.......:.|..|....:.  :|..:..|.|::|.::..:..:...:||........:|.|
plant  1139 TRIIFMSFTCMLCGILFWQKAKEINNQQDLFNVFGSMFTVVLFSGINNCSTVLFSVATERNVFYR 1203

  Fly   475 ETRSGLYSTGQYYAANILALLPGMIIEPLIFVIICYWLTGLR----STFYAFGVTAMCVVLVMNV 535
            |..|.:|::..|..|.:|..:|..:.:.:::|||.|.:.|..    ..|::| .:..|.:|:   
plant  1204 ERFSRMYNSWAYSLAQVLVEIPYSLFQSIVYVIIVYPMVGYHWSVFKVFWSF-YSIFCTLLI--- 1264

  Fly   536 ATACGCFFSTAFNSVPLAMAYLVPLDYI-FMITSGIFIQVN----------SLPVAFWWTQFL-- 587
                       ||...:.:..:.|..:| |.:.|..:..||          ::|..:.|..:|  
plant  1265 -----------FNYFGMLLVVVTPNVHIAFTLRSSFYAIVNLFAGYVMPKPNIPRWWIWMYYLSP 1318

  Fly   588 -SWMLYANEAMTAAQWSGVQNITCFQESADLPCFHTGQDVLDKYSFNESNVYR-NLLAMVGL 647
             ||:|  |..:|:......:.|..|.|...:      .|.|:.| |.    || :.||:|.:
plant  1319 TSWVL--NGLLTSQYGDMEKEILAFGEKKKV------SDFLEDY-FG----YRYDSLALVAV 1367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stNP_524108.1 3a01204 67..665 CDD:273361 168/627 (27%)
ABCG42NP_001319945.1 PLN03140 13..1392 CDD:215599 173/647 (27%)

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