DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment st and ABCG19

DIOPT Version :10

Sequence 1:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_191073.1 Gene:ABCG19 / 824679 AraportID:AT3G55130 Length:725 Species:Arabidopsis thaliana


Alignment Length:732 Identity:184/732 - (25%)
Similarity:326/732 - (44%) Gaps:127/732 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 APERVEQHELQVMPVGSTIEVPSLDSTPK----LSKRNSSERSLPLRS-------------YSKW 60
            |..||......:.|:||    |:||...|    ..|.:|.:   .::|             |.|.
plant    11 AMTRVSAETQYITPIGS----PTLDELLKDCDSFRKGDSGD---GVKSDDPAHHIIDVEALYVKP 68

  Fly    61 SPTEQGATLVWRDLCVYTNVGGSGQR-MKRIINNSTGAIQPGTLMALMGSSGSGKTTLMSTLAFR 124
            .|.......:..|:.:....|.|.|. :|.::::.:|....|.::|::|:||:||:||:..||.|
plant    69 VPYVLNFNNLQYDVTLRRRFGFSRQNGVKTLLDDVSGEASDGDILAVLGASGAGKSTLIDALAGR 133

  Fly   125 QPAGTVVQGDILINGRRI--GPFMHRISGYVYQDDLFLGSLTVLEHLNFMAHLRLDRRVSKEERR 187
            ...|: ::|.:.:||.::  ...:..||.||.||||....|||.|.|.|.:..||.|.:||.::.
plant   134 VAEGS-LRGSVTLNGEKVLQSRLLKVISAYVMQDDLLFPMLTVKETLMFASEFRLPRSLSKSKKM 197

  Fly   188 LIIKELLERTGLLSAAQTRIGSGDDKKVLSGGERKRLAFAVELLNNPVILFCDEPTTGLDSYSAQ 252
            ..::.|:::.||.:||.|.||. :..:.:|||||:|::..::::::|::||.||||:||||.:|.
plant   198 ERVEALIDQLGLRNAANTVIGD-EGHRGVSGGERRRVSIGIDIIHDPIVLFLDEPTSGLDSTNAF 261

  Fly   253 QLVATLYELAQKGTTILCTIHQPSSQLFDNFNNVMLLADGRVAFTGSPQHALSFFANHGYYCPEA 317
            .:|..|..:||.|:.::.:|||||:::.:..:.:::|:.|:..|.|||.....||::.|...||.
plant   262 MVVQVLKRIAQSGSIVIMSIHQPSARIVELLDRLIILSRGKSVFNGSPASLPGFFSDFGRPIPEK 326

  Fly   318 YNPADFLIGVLATDPGYEQASQRSAQHLCD--------QFAVSSAAKQRDML-----------VN 363
            .|.::|.:.::....|    |....:.|.|        :.::..:|.|.:.|           :|
plant   327 ENISEFALDLVRELEG----SNEGTKALVDFNEKWQQNKISLIQSAPQTNKLDQDRSLSLKEAIN 387

  Fly   364 LEIHMAQ-----SGNFPFDTE-VESFRGVAWYKRFHVVWLRASLTLLRDPTIQWLRFIQ----KI 418
            ..:...:     |.:.|...| |.|:...:.::.|         .|.:.....|:|..:    :|
plant   388 ASVSRGKLVSGSSRSNPTSMETVSSYANPSLFETF---------ILAKRYMKNWIRMPELVGTRI 443

  Fly   419 AMAFIIGACFAGTT----EPSQLGVQAVQGALFIMISENTYHPMYSVLNLFPQGFPLFMRETRSG 479
            |...:.| |...|.    :.:..|.|. :..||..:....::.....:.:|.|...:|:|||...
plant   444 ATVMVTG-CLLATVYWKLDHTPRGAQE-RLTLFAFVVPTMFYCCLDNVPVFIQERYIFLRETTHN 506

  Fly   480 LYSTGQYYAANILALLPGMIIEPLIFVIICYWLTGLRSTFYAFGVTAMCVVLVMNVATACGCFFS 544
            .|.|..|..::.|..||.::...|:|..|.:|..||......|....:.:.......::...|.|
plant   507 AYRTSSYVISHSLVSLPQLLAPSLVFSAITFWTVGLSGGLEGFVFYCLLIYASFWSGSSVVTFIS 571

  Fly   545 TAFNSVP-LAMAYLVPLDYI--FMITSGIFIQVNSLPVAFWWTQFLSWMLYANEAMTAAQWSGVQ 606
               ..|| :.:.|:|.:.|:  .::.||.::..:.:|..:.|..::|.:.|..||:...::    
plant   572 ---GVVPNIMLCYMVSITYLAYCLLLSGFYVNRDRIPFYWTWFHYISILKYPYEAVLINEF---- 629

  Fly   607 NITCFQESADLP--CFHTGQDVLD-----------------------KYSFNESNVYR---NLLA 643
                     |.|  ||..|..|.|                       :....||...|   :|||
plant   630 ---------DDPSRCFVRGVQVFDSTLLGGVSDSGKVKLLETLSKSLRTKITESTCLRTGSDLLA 685

  Fly   644 MVGLYFGFHLLGYYCLW 660
            ..|:   ..|..:.|||
plant   686 QQGI---TQLSKWDCLW 699

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stNP_524108.1 3a01204 67..665 CDD:273361 168/661 (25%)
ABCG19NP_191073.1 3a01204 90..724 CDD:273361 166/646 (26%)

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