DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment st and ABCG21

DIOPT Version :9

Sequence 1:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_001189973.1 Gene:ABCG21 / 822149 AraportID:AT3G25620 Length:672 Species:Arabidopsis thaliana


Alignment Length:667 Identity:191/667 - (28%)
Similarity:315/667 - (47%) Gaps:76/667 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 PSLDST-----PKLSKRNSSERSLPLR---------SYSKWSPTEQGATLVWRDLCVYTNVGGSG 84
            |.||..     |....|.||.....||         :||..|.|.:|:  .|        .|...
plant    38 PCLDDDNDHDGPSHQSRQSSVLRQSLRPIILKFEELTYSIKSQTGKGS--YW--------FGSQE 92

  Fly    85 QRMKRIINNS-TGAIQPGTLMALMGSSGSGKTTLMSTLAFRQPAGTVVQGDILINGRRIGPFMHR 148
            .:..|::... :|.::||.|:|::|.||||||||::.||.|...  .:.|.:..||......:.|
plant    93 PKPNRLVLKCVSGIVKPGELLAMLGPSGSGKTTLVTALAGRLQG--KLSGTVSYNGEPFTSSVKR 155

  Fly   149 ISGYVYQDDLFLGSLTVLEHLNFMAHLRLDRRVSKEERRLIIKELLERTGLLSAAQTRIGSGDDK 213
            .:|:|.|||:....|||:|.|.:.|.|||.:.::::|:...::.::...||.....:.||.|..:
plant   156 KTGFVTQDDVLYPHLTVMETLTYTALLRLPKELTRKEKLEQVEMVVSDLGLTRCCNSVIGGGLIR 220

  Fly   214 KVLSGGERKRLAFAVELLNNPVILFCDEPTTGLDSYSAQQLVATLYELAQKGTTILCTIHQPSSQ 278
            .: |||||||::...|:|.||.:|..||||:||||.:|.::||||..||:.|.|::.|||||||:
plant   221 GI-SGGERKRVSIGQEMLVNPSLLLLDEPTSGLDSTTAARIVATLRSLARGGRTVVTTIHQPSSR 284

  Fly   279 LFDNFNNVMLLADGRVAFTGSPQHALSFFANHGYYCPEAY-NPADFLI----GVLATDPGYEQ-- 336
            |:..|:.|::|::|...::|.....:.:|.:.||....:: |||||::    |:.:....|:|  
plant   285 LYRMFDKVLVLSEGCPIYSGDSGRVMEYFGSIGYQPGSSFVNPADFVLDLANGITSDTKQYDQIE 349

  Fly   337 ----ASQRSAQHLCDQFAVSSAAKQRDMLVNLEIHMAQSGNFPFDTEVESFRGVA--------WY 389
                ..:...|:...|..:||..|.....:..|:    |..||.|......|..|        |:
plant   350 TNGRLDRLEEQNSVKQSLISSYKKNLYPPLKEEV----SRTFPQDQTNARLRKKAITNRWPTSWW 410

  Fly   390 KRFHVVWLRASLTLLRDPTIQWLRFIQKIAMAFIIGACFAGTTEPSQLGVQAVQGALFIMISENT 454
            .:|.|: |:..|......:...||....::::.:.|..:   .......:|...|.||.......
plant   411 MQFSVL-LKRGLKERSHESFSGLRIFMVMSVSLLSGLLW---WHSRVAHLQDQVGLLFFFSIFWG 471

  Fly   455 YHPMYSVLNLFPQGFPLFMRETRSGLYSTGQYYAANILALLPGMIIEPLIFVIICYWLTGLRSTF 519
            :.|:::.:..|||..|:.::|..||:|....||.|..:..||..:|.|.|||.|.||:.||:.:.
plant   472 FFPLFNAIFTFPQERPMLIKERSSGIYRLSSYYIARTVGDLPMELILPTIFVTITYWMGGLKPSL 536

  Fly   520 YAFGVTAMCV---VLV-MNVATACGCFFSTAFNSVPLAMAYLVPLDYIFMITSGIFIQVNSLPVA 580
            ..|.:|.|.|   ||| ..|..|.|.....|..:..|:...::    :|::..|.:||  .:|..
plant   537 TTFIMTLMIVLYNVLVAQGVGLALGAILMDAKKAATLSSVLML----VFLLAGGYYIQ--HIPGF 595

  Fly   581 FWWTQFLSWMLYANEAMTAAQWSGVQNITCFQESADLPCFHTGQDVLDKYSFNE---SNVYRNLL 642
            ..|.:::|:..|..:.:...|::..:...|   .:.|.|     .|:|......   .|:..::|
plant   596 IAWLKYVSFSHYCYKLLVGVQYTWDEVYEC---GSGLHC-----SVMDYEGIKNLRIGNMMWDVL 652

  Fly   643 AMVGLYFGFHLLGYYCL 659
            |:..:...:.:|.|..|
plant   653 ALAVMLLLYRVLAYLAL 669

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stNP_524108.1 ABCG_EPDR 66..298 CDD:213180 86/232 (37%)
3a01204 67..665 CDD:273361 177/620 (29%)
ABC2_membrane 395..600 CDD:279410 53/208 (25%)
ABCG21NP_001189973.1 PLN03211 43..670 CDD:215634 188/662 (28%)
P-loop_NTPase 89..304 CDD:304359 84/217 (39%)
ABC2_membrane 416..615 CDD:279410 53/208 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 1 1.000 - - mtm1120
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.780

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