DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment st and ABCG29

DIOPT Version :10

Sequence 1:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_566543.1 Gene:ABCG29 / 820881 AraportID:AT3G16340 Length:1416 Species:Arabidopsis thaliana


Alignment Length:658 Identity:181/658 - (27%)
Similarity:291/658 - (44%) Gaps:129/658 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 LSKRNSSERSLPLRSYSKWSPTEQGATLVWRDLCV-YTNVG------------GSGQRMKRIINN 93
            :||.|:.|......|.||....::|..|.:..|.: :.||.            |..:...:::..
plant   780 VSKENTEENRAENGSKSKSIDVKRGMVLPFTPLTMSFDNVNYYVDMPKEMKEQGVSKDKLQLLKE 844

  Fly    94 STGAIQPGTLMALMGSSGSGKTTLMSTLAFRQPAGTVVQGDILING--RRIGPFMHRISGYVYQD 156
            .||..:||.|.||||.||:||||||..||.|:..| .::|||.|:|  :|...|. |||||..|:
plant   845 VTGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGG-YIEGDIRISGFPKRQETFA-RISGYCEQN 907

  Fly   157 DLFLGSLTVLEHLNFMAHLRLDRRVSKEERRLIIKELLERTGLLSAAQTRIG----SGDDKKVLS 217
            |:....:||.|.|.:.|.|||.:.|:|.|:...:.|::|...|.|.....:|    :|     ||
plant   908 DIHSPQVTVKESLIYSAFLRLPKEVTKYEKMRFVDEVMELVELESLKDAVVGLPGITG-----LS 967

  Fly   218 GGERKRLAFAVELLNNPVILFCDEPTTGLDSYSAQQLVATLYELAQKGTTILCTIHQPSSQLFDN 282
            ..:||||..||||:.||.|:|.||||:|||:.:|..::.|:......|.|::|||||||..:|:.
plant   968 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA 1032

  Fly   283 FNNVMLL-ADGRVAFTG----SPQHALSFF-ANHGY-YCPEAYNPADFLIGVLATDPGYEQASQR 340
            |:.::|| ..|:|.:.|    :....:.:| |.||. ...|.||||.:::.|.:.     .|..:
plant  1033 FDELLLLKRGGQVIYAGPLGQNSHKIIEYFQAIHGVPKIKEKYNPATWMLEVSSM-----AAEAK 1092

  Fly   341 SAQHLCDQFAVSSAAKQRDMLVNLEIHMAQSG--NFPFDTE-----VESFRGVAWYKRFHVVWLR 398
            ......:.:..||..:|...||. |:.....|  :..|.|.     :..|:...|.:     |  
plant  1093 LEIDFAEHYKTSSLYQQNKNLVK-ELSTPPQGASDLYFSTRFSQSLLGQFKSCLWKQ-----W-- 1149

  Fly   399 ASLTLLRDPTIQWLRFIQKIAMAFIIGACF--AGTTEPSQLGVQAVQGALFIMI------SENTY 455
              :|..|.|.....||...:|.|.::|:.|  .||...:...:..|.||::..:      :.::.
plant  1150 --ITYWRTPDYNLARFFFTLAAAVMLGSIFWKVGTKRENANDLTKVIGAMYAAVLFVGVNNSSSV 1212

  Fly   456 HPMYSVLNLFPQGFPLFMRETRSGLYSTGQYYAANILALLPGMIIEP-----LIFVIIC------ 509
            .|:.:|..      .:|.||..:.:||...|..|.::..:|.::|:.     :|:.::|      
plant  1213 QPLIAVER------SVFYRERAAEMYSALPYALAQVVCEIPYVLIQTTYYTLIIYAMMCFEWTLA 1271

  Fly   510 --YW------LTGLRSTFYAFGVTAMCVVLVMN---VATACGCFFSTAFNSVPLAMAYLVPLDYI 563
              :|      ::.|..|:|..    |.|.|..|   .|...|.|:.                  :
plant  1272 KFFWFYFVSFMSFLYFTYYGM----MTVALTPNQQVAAVFAGAFYG------------------L 1314

  Fly   564 FMITSGIFIQVNSLPVAFWWTQF-----LSWMLYANEAMTAAQWSGVQNITCFQESADLPCF--- 620
            |.:.||..|....:|.  ||..:     ::|.:|   .:..:|:..|::.......|:.|..   
plant  1315 FNLFSGFVIPRPRIPK--WWIWYYWICPVAWTVY---GLIVSQYGDVEDTIKVPGMANDPTIKWY 1374

  Fly   621 ---HTGQD 625
               |.|.|
plant  1375 IENHYGYD 1382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stNP_524108.1 3a01204 67..665 CDD:273361 173/633 (27%)
ABCG29NP_566543.1 PLN03140 1..1416 CDD:215599 181/658 (28%)

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