DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment st and ABCG26

DIOPT Version :9

Sequence 1:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_187928.2 Gene:ABCG26 / 820512 AraportID:AT3G13220 Length:685 Species:Arabidopsis thaliana


Alignment Length:696 Identity:190/696 - (27%)
Similarity:331/696 - (47%) Gaps:72/696 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 ERVEQ-HELQVMPVGSTIEVPSLDSTPKLSKRN--SSE-------------RSLPLRSYSKWSPT 63
            |.||: |.:|:  .||...|.:::..|:...||  |||             ...||..:.|:...
plant     8 EEVEENHVMQI--TGSNGIVHNMEFMPQAYLRNQYSSEIDIDEEFVSTYPLEDAPLPIFLKFEDV 70

  Fly    64 E--------QGATLV---WRDLCVYTNVGGSGQRMKRIINNSTGAIQPGTLMALMGSSGSGKTTL 117
            |        ..|.||   ...:..:||....|  .|.|:...||:..||.::||||.||||||||
plant    71 EYKVRNSHASSANLVKTMVSKVVTHTNPDPDG--YKHILKGITGSTGPGEILALMGPSGSGKTTL 133

  Fly   118 MSTLAFRQPAGTVVQGDILINGRRIGPFMHRISGYVYQDDLFLGSLTVLEHLNFMAHLRLDRRVS 182
            :..:..|....  |:|.:..|.....|.:.|..|:|.|||:.|..|||.|.|.|.|.|||...:|
plant   134 LKIMGGRLTDN--VKGKLTYNDIPYSPSVKRRIGFVTQDDVLLPQLTVEETLAFAAFLRLPSSMS 196

  Fly   183 KEERRLIIKELLERTGLLSAAQTRIGSGDDKKVLSGGERKRLAFAVELLNNPVILFCDEPTTGLD 247
            ||::...|:.:::..||....:||:|.|..|.: |||||||.:.|.|:|.:|.:|..||||:|||
plant   197 KEQKYAKIEMIIKELGLERCRRTRVGGGFVKGI-SGGERKRASIAYEILVDPSLLLLDEPTSGLD 260

  Fly   248 SYSAQQLVATLYELAQKGTTILCTIHQPSSQLFDNFNNVMLLADGRVAFTGSPQHALSFFANHGY 312
            |.||.:|:..|..:|:.|.|::.|||||||::|..|:.::|:::|..||.|..:.::.:|::...
plant   261 STSATKLLHILQGVAKAGRTVITTIHQPSSRMFHMFDKLLLISEGHPAFYGKARESMEYFSSLRI 325

  Fly   313 YCPEAYNPADFLIG--------------VLATDPGYEQASQRSAQHLCDQFAVSSAAKQRDMLVN 363
            ....|.|||:||:.              :||.......:.:...::|..::......|:::    
plant   326 LPEIAMNPAEFLLDLATGQVSDISLPDELLAAKTAQPDSEEVLLKYLKQRYKTDLEPKEKE---- 386

  Fly   364 LEIHMAQSG--NFPFDTEVESFRGVAWYKRFHVVWLRASLTLLRDPTIQWLRFIQKIAMAFIIGA 426
             |.|..:..  :.....:|:....::|:.:|.::..|......|| ....||.:|.:.:|.::|.
plant   387 -ENHRNRKAPEHLQIAIQVKKDWTLSWWDQFLILSRRTFRERRRD-YFDKLRLVQSLGVAVVLGL 449

  Fly   427 CFAGTTEPSQLGVQAVQGALFIMISENTYHPMYSVLNLFPQGFPLFMRETRSGLYSTGQYYAANI 491
            .:..:...::..::...|.:|.:....|...::..:.:||......::|.::.:|....||..:.
plant   450 LWWKSKTDTEAHLRDQVGLMFYICIFWTSSSLFGAVYVFPFEKIYLVKERKAEMYRLSVYYVCST 514

  Fly   492 LALLPGMIIEPLIFVIICYWLTGLRSTFYAFGVTAMCVVLVMNVATACGCFFSTAFNSVPLA--M 554
            |..:...::.|..|:||.|::.........|..|.:.::|:...:...|.|...:..|:..|  :
plant   515 LCDMVAHVLYPTFFMIIVYFMAEFNRNIPCFLFTVLTILLIAITSQGAGEFLGASVLSIKRAGMI 579

  Fly   555 AYLVPLDYIFMITSGIFIQVNSLPVAFWWTQFLSWMLYANEAMTAAQWSGVQNITCFQESADLPC 619
            |.||.:  :|::|.|.::|  .:|....|.::||:|.|....:...|:|..|...|..:..   |
plant   580 ASLVLM--LFLLTGGYYVQ--HIPKFMQWLKYLSFMHYGFRLLLKVQYSADQLFECGSKGG---C 637

  Fly   620 FHTGQDVLDKYSFNESNV---YRNLLAMVGLYFGFHLLGYYCLWRR 662
                :.:....||:..|:   .:.|..::.:.||:.|..|:||.::
plant   638 ----RTLQSSSSFDTINLNGGLQELWVLLAMAFGYRLCAYFCLRKK 679

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stNP_524108.1 ABCG_EPDR 66..298 CDD:213180 97/234 (41%)
3a01204 67..665 CDD:273361 172/620 (28%)
ABC2_membrane 395..600 CDD:279410 43/206 (21%)
ABCG26NP_187928.2 PLN03211 62..678 CDD:215634 174/637 (27%)
ABCG_EPDR 93..311 CDD:213180 94/222 (42%)
ABC2_membrane 435..621 CDD:279410 40/189 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 1 1.000 - - otm2959
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.780

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