DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment st and ABCG34

DIOPT Version :10

Sequence 1:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_181179.2 Gene:ABCG34 / 818211 AraportID:AT2G36380 Length:1453 Species:Arabidopsis thaliana


Alignment Length:623 Identity:171/623 - (27%)
Similarity:280/623 - (44%) Gaps:122/623 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 GSTIEVPSLDS-TPKLSKRNSSERSLPLRSYSKWSPTEQGATLVWRDLCVYTNV-------GGSG 84
            ||.:|:.|..| .||      ....||.          |..:|.:.::..|.::       |..|
plant   826 GSVVELTSTSSHGPK------KGMVLPF----------QPLSLAFNNVNYYVDMPAEMKAQGVEG 874

  Fly    85 QRMKRIINNSTGAIQPGTLMALMGSSGSGKTTLMSTLAFRQPAGTVVQGDILING--RRIGPFMH 147
            .|: :::.:..||.:||.|.||:|.||:||||||..||.|:..| .|:|.|.|:|  :....|. 
plant   875 DRL-QLLRDVGGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG-YVEGSINISGYPKNQATFA- 936

  Fly   148 RISGYVYQDDLFLGSLTVLEHLNFMAHLRLDRRVSKEERRLIIKELLERTGLLSAAQTRIG-SGD 211
            |:|||..|:|:....:||.|.|.:.|.|||...:..:.|.:.::|::|...|.....:.:| .|.
plant   937 RVSGYCEQNDIHSPHVTVYESLIYSAWLRLSADIDTKTREMFVEEVMELVELKPLRNSIVGLPGV 1001

  Fly   212 DKKVLSGGERKRLAFAVELLNNPVILFCDEPTTGLDSYSAQQLVATLYELAQKGTTILCTIHQPS 276
            |.  ||..:||||..||||:.||.|:|.||||:|||:.:|..::.|:......|.|::|||||||
plant  1002 DG--LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 1064

  Fly   277 SQLFDNFNNVMLL-ADGRVAFTGS----PQHALSFF-ANHGY-YCPEAYNPADFLIGVLATDPGY 334
            ..:|::|:.::|: ..|:|.:.|:    .|..:.:| |..|. ...:.||||.:::.|  |.|..
plant  1065 IDIFESFDELLLMKRGGQVIYAGTLGHHSQKLVEYFEAIEGVPKIKDGYNPATWMLDV--TTPSM 1127

  Fly   335 EQASQRSAQHLCDQFAVSSAAKQRDMLVNLEIHMAQSGN----------FPFDTEVESFRGVAWY 389
            |  ||.|....  |..|:|:..:|:..:..|:.....|:          .||.|:.::    .::
plant  1128 E--SQMSVDFA--QIFVNSSVNRRNQELIKELSTPPPGSNDLYFRTKYAQPFSTQTKA----CFW 1184

  Fly   390 KRFHVVWLRASLTLLRDPTIQWLRFIQKIAMAFIIGACF--AGTTEPSQLGVQAVQGALFIMI-- 450
            |.:...|        |.|....:||:..:.:..:.|..|  .||....:..:....||::..:  
plant  1185 KMYWSNW--------RYPQYNAIRFLMTVVIGVLFGLLFWQTGTKIEKEQDLNNFFGAMYAAVLF 1241

  Fly   451 ----SENTYHPMYSVLNLFPQGFPLFMRETRSGLYSTGQYYAANILALLPGMIIEPLIFVIICYW 511
                :..|..|..::..      .:|.||..:|:||...|..:.:...:....|:..::.:|.|.
plant  1242 LGATNAATVQPAVAIER------TVFYREKAAGMYSAIPYAISQVAVEIMYNTIQTGVYTLILYS 1300

  Fly   512 LTGLRST------FYAFGVTA---------MCVVLVMN--VATACGCFFSTAFNSVPLAMAYLVP 559
            :.|...|      ||.:.:|.         |.|.|..|  :|..|..||.:.:|           
plant  1301 MIGYDWTVVKFFWFYYYMLTCFVYFTLYGMMLVALTPNYQIAGICLSFFLSFWN----------- 1354

  Fly   560 LDYIFMITSGIFIQVNSLPVAFWWTQF-----LSWMLY 592
                  :.||..|....:|:  ||..:     ::|.||
plant  1355 ------LFSGFLIPRPQIPI--WWRWYYWASPVAWTLY 1384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stNP_524108.1 3a01204 67..665 CDD:273361 161/583 (28%)
ABCG34NP_181179.2 PLN03140 11..1453 CDD:215599 171/623 (27%)

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