DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment st and ABCG32

DIOPT Version :9

Sequence 1:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_180259.1 Gene:ABCG32 / 817232 AraportID:AT2G26910 Length:1420 Species:Arabidopsis thaliana


Alignment Length:622 Identity:171/622 - (27%)
Similarity:285/622 - (45%) Gaps:109/622 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 LDSTPKLSKRNSSERSLPLRSYSKWSPT-------EQGATLVWRDLCV-YTNVG----------- 81
            ||...|  ||...|..:.||.|.:.|.:       .:|..|.::.|.: ::|:.           
plant   773 LDEREK--KRKGDEFVVELREYLQHSGSIHGKYFKNRGMVLPFQPLSLSFSNINYYVDVPLGLKE 835

  Fly    82 -GSGQRMKRIINNSTGAIQPGTLMALMGSSGSGKTTLMSTLAFRQPAGTVVQGDILING--RRIG 143
             |..:...:::.|.|||.:||.|.||:|.||:||||||..||.|:..|| ::||:.|:|  :|..
plant   836 QGILEDRLQLLVNITGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGT-IEGDVYISGFPKRQE 899

  Fly   144 PFMHRISGYVYQDDLFLGSLTVLEHLNFMAHLRLDRRVSKEERRLIIKELLERTGLLSAAQTRIG 208
            .|. |||||..|:|:....|||:|.|.|.|.|||...:..|.:|..:.|::|...|.|.:...:|
plant   900 TFA-RISGYCEQNDVHSPCLTVVESLLFSACLRLPADIDSETQRAFVHEVMELVELTSLSGALVG 963

  Fly   209 -SGDDKKVLSGGERKRLAFAVELLNNPVILFCDEPTTGLDSYSAQQLVATLYELAQKGTTILCTI 272
             .|.|.  ||..:||||..||||:.||.|:|.||||:|||:.:|..::.|:..:...|.||:|||
plant   964 LPGVDG--LSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGRTIVCTI 1026

  Fly   273 HQPSSQLFDNFNNVMLLADGRVAFTGSPQ-----HALSFFAN-HGYY-CPEAYNPADFLIGVLAT 330
            ||||..:|::|:.::.:..|.......|.     ..:.:|.: .|.. ....:|||.:::.|.|:
plant  1027 HQPSIDIFESFDELLFMKRGGELIYAGPLGQKSCELIKYFESIEGVQKIKPGHNPAAWMLDVTAS 1091

  Fly   331 DP----GYEQASQRSAQHLCDQFAVSSAAKQRDMLVNLEIHMAQSGNFPFDTEVESFRGVAWYKR 391
            ..    |.:.|......:||          ||:..: :|: :::..|...:.|..:....:.|.:
plant  1092 TEEHRLGVDFAEIYRNSNLC----------QRNKEL-IEV-LSKPSNIAKEIEFPTRYSQSLYSQ 1144

  Fly   392 FHVVWLRASLTLLRDPTIQWLRFIQKIAMAFIIGA-CFA-GTTEPSQLGVQAVQGA-----LFIM 449
            |.....:.:|:..|:|....:||...:.::.::|. |:. |:...:|..:....|:     |||.
plant  1145 FVACLWKQNLSYWRNPQYTAVRFFYTVVISLMLGTICWKFGSKRDTQQQLFNAMGSMYAAVLFIG 1209

  Fly   450 ISENT-YHPMYSVLNLFPQGFPLFMRETRSGLYSTGQYYAANILALLPGMIIEPLIFVIICY--- 510
            |:..| ..|:.|:     :.|..: ||..:|:||...:..|.:....|.::.:..|:..|.|   
plant  1210 ITNATAAQPVVSI-----ERFVSY-RERAAGMYSALPFAFAQVFIEFPYVLAQSTIYSTIFYAMA 1268

  Fly   511 ---WLTGLRSTFYAF------------GVTAMCVVLVMNVATACGCFFSTAFNSVPLAMAYLVPL 560
               | :.::..:|.|            |:....:....|||:.....|...:|            
plant  1269 AFEW-SAVKFLWYLFFMYFSIMYFTFYGMMTTAITPNHNVASIIAAPFYMLWN------------ 1320

  Fly   561 DYIFMITSGIFIQVNSLPVAFWWTQF-----LSWMLY 592
                 :.||..|....:|:  ||..:     ::|.||
plant  1321 -----LFSGFMIPYKRIPL--WWRWYYWANPVAWTLY 1350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stNP_524108.1 ABCG_EPDR 66..298 CDD:213180 96/247 (39%)
3a01204 67..665 CDD:273361 160/584 (27%)
ABC2_membrane 395..600 CDD:279410 46/229 (20%)
ABCG32NP_180259.1 PLN03140 3..1420 CDD:215599 171/622 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
32.870

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