DRSC/TRiP Functional Genomics Resources

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Protein Alignment st and abcg2d

DIOPT Version :9

Sequence 1:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster
Sequence 2:XP_009292498.3 Gene:abcg2d / 735310 ZFINID:ZDB-GENE-050517-38 Length:658 Species:Danio rerio


Alignment Length:671 Identity:196/671 - (29%)
Similarity:324/671 - (48%) Gaps:62/671 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 MPVGSTIEVPSLDSTPKLSKRNSSERSL--PLRSYSKWSPTEQGATLVWRDL-----------CV 76
            ||..:..|...:......:.:|.|:..:  |::.       :.|||:.:..:           |.
Zfish     1 MPDNAVFEHDQISEETGRNGQNGSKIIIMEPMKK-------QHGATVSFHSIRYRVEQKTGPVCR 58

  Fly    77 YTNVGGSGQRMKRIINNSTGAIQPGTLMALMGSSGSGKTTLMSTLAFRQ-PAGTVVQGDILINGR 140
            .|.|      .|.|:.:..|.::|| |.|::|.:||||::.:..||.|: |||  :.|::|:||.
Zfish    59 RTTV------QKEILLDLNGIMRPG-LNAILGPTGSGKSSFLDVLAGRKDPAG--LSGEVLVNGA 114

  Fly   141 RIGPFMHRISGYVYQDDLFLGSLTVLEHLNFMAHLRLDRRVSKEERRLIIKELLERTGLLSAAQT 205
            ........:||||.|||:.:|:|||.|:|:|.|.|||...||..|:...:..|:...||...|.:
Zfish   115 LQPANFKCLSGYVVQDDIVMGTLTVRENLSFSAALRLSSHVSPREKEARVNHLISELGLNKVADS 179

  Fly   206 RIGSGDDKKVLSGGERKRLAFAVELLNNPVILFCDEPTTGLDSYSAQQLVATLYELAQKGTTILC 270
            ::|: ...:.:|||||||.:..:||:.:|.:||.||||||||:.:|..::..|..:|.:|.||:.
Zfish   180 KVGT-QIIRGISGGERKRTSIGMELIIDPSVLFLDEPTTGLDASTAHSVLLLLKRMAGQGRTIIM 243

  Fly   271 TIHQPSSQLFDNFNNVMLLADGRVAFTGSPQHALSFFANHGYYCPEAYNPADFLIGVLATDPGYE 335
            :||||...::..|:::.|||:|:..:.|..|.||.:|:|.||.|....|||||.:.|:  :....
Zfish   244 SIHQPRFSIYRLFDSLTLLANGKQVYHGPAQDALDYFSNIGYACEAHNNPADFFLDVI--NGSSV 306

  Fly   336 QASQRSAQHLCDQFAVSSAAKQRDML-----------VNLEI-HMAQSGNFPFDTEVESFRGVAW 388
            ...|.:....||..|||..:.:..::           |..|: |:.|:.:....:.......:.:
Zfish   307 TKIQNNGDAECDVSAVSRQSVEDQLMEKYRSCSFARAVRAELDHIIQTKDSSSSSVAAECHSITY 371

  Fly   389 YKRF-----HVVWLRASLTLLRDPTIQWLRFIQKIAMAFIIGACFAGTTEPSQLGVQAVQGALFI 448
            ...|     .|:| |....|:.:|.....:......||.|:||.|.|..: .|.|:|...|.|| 
Zfish   372 SSSFCQQLRWVLW-RTFWNLMLNPQTSVAQLAVTTLMAAIVGAIFYGVKD-DQSGIQNRFGVLF- 433

  Fly   449 MISENTYHPMYSVLNLFPQGFPLFMRETRSGLYSTGQYYAANILA-LLPGMIIEPLIFVIICYWL 512
            .|:.|......|...||.....||:.|..||.|....::.:.||: ::....|..::|..:.|::
Zfish   434 FITTNQCFSTLSAAELFITERKLFIHEYTSGYYRVSVFFLSKILSDIITQRTIPSVLFSCVVYFM 498

  Fly   513 TGLRSTFYAFGVTAMCVVLVMNVATACGCFFSTAFNSVPLAMAYLVPLDYIF-MITSGIFIQVNS 576
            .||:.|..||.:..:.|:||...|.|.....| |..||......|:.:.:|| ||.||:.:.:.|
Zfish   499 IGLKPTASAFFIFMLTVILVSCTAAAMAMAIS-ADQSVVAVANILMTVSFIFMMIFSGLLVNLKS 562

  Fly   577 LPVAFWWTQFLSWMLYANEAMTAAQWSGVQNITCFQESADLPCFH----TGQDVLDKYSFNESN- 636
            :.....|.::||...|..||:...::.|:.......||...|..|    ||:..|.....:.|: 
Zfish   563 IMDWLSWLKYLSIPRYGLEALEINEFVGLSFCGNVSESLASPAAHVLMCTGEQHLTFQGIDYSSW 627

  Fly   637 -VYRNLLAMVGLYFGFHLLGY 656
             :::|.:|:..:...|.::.|
Zfish   628 GLWQNHVALTVMTLIFLIIAY 648

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stNP_524108.1 ABCG_EPDR 66..298 CDD:213180 89/243 (37%)
3a01204 67..665 CDD:273361 189/627 (30%)
ABC2_membrane 395..600 CDD:279410 61/206 (30%)
abcg2dXP_009292498.3 PRK10535 56..658 CDD:333000 187/609 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574374
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 1 1.000 - - mtm6474
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.850

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