DRSC/TRiP Functional Genomics Resources

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Protein Alignment st and Abcg8

DIOPT Version :9

Sequence 1:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_080456.1 Gene:Abcg8 / 67470 MGIID:1914720 Length:673 Species:Mus musculus


Alignment Length:689 Identity:178/689 - (25%)
Similarity:297/689 - (43%) Gaps:130/689 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 STIEVPSLDSTPKLSKR-----NSSERSLPLRSYSKWSPTEQGATLVWRDLCVYTNVGGSGQRMK 88
            :|:||..|.....::.:     ..::..:|.||:|.....|.|                      
Mouse    46 NTLEVRDLTYQVDIASQVPWFEQLAQFKIPWRSHSSQDSCELG---------------------- 88

  Fly    89 RIINNSTGAIQPGTLMALMGSSGSGKTTLMSTLAFRQPAGTVVQGDILINGRRIGP-FMHRISGY 152
              |.|.:..::.|.::|::||||.|:.:|:..:..|...|.:..|.|.|||:...| .:.:...:
Mouse    89 --IRNLSFKVRSGQMLAIIGSSGCGRASLLDVITGRGHGGKMKSGQIWINGQPSTPQLVRKCVAH 151

  Fly   153 VYQDDLFLGSLTVLEHLNFMAHLRLDRRVSKEERRLIIKELLERTGLLSAAQTRIGSGDDKKVLS 217
            |.|.|..|.:|||.|.|.|:|.:||.|..|:.:|...:::::....|...|.||:|:...:.| |
Mouse   152 VRQHDQLLPNLTVRETLAFIAQMRLPRTFSQAQRDKRVEDVIAELRLRQCANTRVGNTYVRGV-S 215

  Fly   218 GGERKRLAFAVELLNNPVILFCDEPTTGLDSYSAQQLVATLYELAQKGTTILCTIHQPSSQLFDN 282
            ||||:|::..|:||.||.||..||||:||||::|..||.||..||:....:|.::|||.|.:|..
Mouse   216 GGERRRVSIGVQLLWNPGILILDEPTSGLDSFTAHNLVTTLSRLAKGNRLVLISLHQPRSDIFRL 280

  Fly   283 FNNVMLLADGRVAFTGSPQHALSFFANHGYYCPEAYNPADFLIGVLATDPGYEQASQRSAQHLCD 347
            |:.|:|:..|...:.|:.|..:.:|.:.|:.||...|||||.:.:.:.|       :||      
Mouse   281 FDLVLLMTSGTPIYLGAAQQMVQYFTSIGHPCPRYSNPADFYVDLTSID-------RRS------ 332

  Fly   348 QFAVSSAAKQRDMLVNLEIHMAQSGNFPFDTEVESFRGVAW---YKRFHVVWLRASLTLLRD--- 406
                    |:|::..   :..|||....|..:|:.|....|   .|..:......||||.:|   
Mouse   333 --------KEREVAT---VEKAQSLAALFLEKVQGFDDFLWKAEAKELNTSTHTVSLTLTQDTDC 386

  Fly   407 ----------------------------PTIQWLRFIQKIAMAFIIGACFAGTTEPSQLGVQAVQ 443
                                        ||: .:...:...|:.|||..:.| ....||......
Mouse   387 GTAVELPGMIEQFSTLIRRQISNDFRDLPTL-LIHGSEACLMSLIIGFLYYG-HGAKQLSFMDTA 449

  Fly   444 GALFIMISENTYHPMYSVLNLFPQGFPLFMRETRSGLYSTGQYYAANILALLPGMIIEPLIFVII 508
            ..||::.:...::.:..|::.......:...|...|||:.|.|:.|.||..||......:|:.:.
Mouse   450 ALLFMIGALIPFNVILDVVSKCHSERSMLYYELEDGLYTAGPYFFAKILGELPEHCAYVIIYAMP 514

  Fly   509 CYWLTGLRSTFYAFGVTAMCVVLVMNVATACGCFFSTAFNSVPLAMAYLVPLDYI---------- 563
            .||||.||.....|   .:..:||..|...|        .::.||.:.::|..::          
Mouse   515 IYWLTNLRPVPELF---LLHFLLVWLVVFCC--------RTMALAASAMLPTFHMSSFFCNALYN 568

  Fly   564 -FMITSGIFIQVNSLPVAFWWTQFLSWMLYANEAMTAAQWSG------VQNITCFQESADLPCFH 621
             |.:|:|..|.:::|.:...|...||::.:....:...|::|      :.|.|          |.
Mouse   569 SFYLTAGFMINLDNLWIVPAWISKLSFLRWCFSGLMQIQFNGHLYTTQIGNFT----------FS 623

  Fly   622 -TGQDVLDKYSFNESNVYRNLLAMVGLYFGFHLLGYYCL 659
             .|..::.....|...:|...|.::|:.:||..|.|..|
Mouse   624 ILGDTMISAMDLNSHPLYAIYLIVIGISYGFLFLYYLSL 662

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stNP_524108.1 ABCG_EPDR 66..298 CDD:213180 79/232 (34%)
3a01204 67..665 CDD:273361 168/646 (26%)
ABC2_membrane 395..600 CDD:279410 51/246 (21%)
Abcg8NP_080456.1 ABCG_White 71..296 CDD:213201 84/249 (34%)
3a01204 89..664 CDD:273361 168/622 (27%)
ABC2_membrane 402..606 CDD:279410 46/216 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167831364
Domainoid 1 1.000 90 1.000 Domainoid score I7740
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53689
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.760

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