DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment st and ABCG8

DIOPT Version :9

Sequence 1:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster
Sequence 2:XP_011531331.1 Gene:ABCG8 / 64241 HGNCID:13887 Length:677 Species:Homo sapiens


Alignment Length:606 Identity:176/606 - (29%)
Similarity:274/606 - (45%) Gaps:68/606 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 INNSTGAIQPGTLMALMGSSGSGKTTLMSTLAFRQPAGTVVQGDILINGRRIGP-FMHRISGYVY 154
            |.|.:..::.|.::|::||||.|:.:|:..:..|...|.:..|.|.|||:...| .:.:...:|.
Human    92 IQNLSFKVRSGQMLAIIGSSGCGRASLLDVITGRGHGGKIKSGQIWINGQPSSPQLVRKCVAHVR 156

  Fly   155 QDDLFLGSLTVLEHLNFMAHLRLDRRVSKEERRLIIKELLERTGLLSAAQTRIGS----GDDKKV 215
            |.:..|.:|||.|.|.|:|.:||.|..|:.:|...:::::....|...|.||:|:    |     
Human   157 QHNQLLPNLTVRETLAFIAQMRLPRTFSQAQRDKRVEDVIAELRLRQCADTRVGNMYVRG----- 216

  Fly   216 LSGGERKRLAFAVELLNNPVILFCDEPTTGLDSYSAQQLVATLYELAQKGTTILCTIHQPSSQLF 280
            ||||||:|::..|:||.||.||..||||:||||::|..||.||..||:....:|.::|||.|.:|
Human   217 LSGGERRRVSIGVQLLWNPGILILDEPTSGLDSFTAHNLVKTLSRLAKGNRLVLISLHQPRSDIF 281

  Fly   281 DNFNNVMLLADGRVAFTGSPQHALSFFANHGYYCPEAYNPADFLIGVLATD---PGYEQASQRSA 342
            ..|:.|:|:..|...:.|:.||.:.:|...||.||...|||||.:.:.:.|   ...|.|::..|
Human   282 RLFDLVLLMTSGTPIYLGAAQHMVQYFTAIGYPCPRYSNPADFYVDLTSIDRRSREQELATREKA 346

  Fly   343 QHLC----------DQFAVSSAAKQRDMLVNLEIHMAQSGNFPFDTEV----ESFRGVAWYKRFH 393
            |.|.          |.|...:..|..|     |....:|...|.||..    ....|..  ::|.
Human   347 QSLAALFLEKVRDLDDFLWKAETKDLD-----EDTCVESSVTPLDTNCLPSPTKMPGAV--QQFT 404

  Fly   394 VVWLRASLTLLRD-PTIQWLRFIQKIAMAFIIGACFAGTTEPSQLGVQAVQGALFIMISENTYHP 457
            .:..|......|| ||: .:...:...|:..||..:.|... .||........||::.:...::.
Human   405 TLIRRQISNDFRDLPTL-LIHGAEACLMSMTIGFLYFGHGS-IQLSFMDTAALLFMIGALIPFNV 467

  Fly   458 MYSVLNLFPQGFPLFMRETRSGLYSTGQYYAANILALLPGMIIEPLIFVIICYWLTGLRSTFYAF 522
            :..|::.......:...|...|||:||.|:.|.||..||......:|:.:..|||..||.....|
Human   468 ILDVISKCYSERAMLYYELEDGLYTTGPYFFAKILGELPEHCAYIIIYGMPTYWLANLRPGLQPF 532

  Fly   523 GVTAMCVVLV------MNVATAC-------GCFFSTA-FNSVPLAMAYLVPLDYIFMITSGIFIQ 573
            .:..:.|.||      |.:|.|.       ..|||.| :||              |.:..|..|.
Human   533 LLHFLLVWLVVFCCRIMALAAAALLPTFHMASFFSNALYNS--------------FYLAGGFMIN 583

  Fly   574 VNSLPVAFWWTQFLSWMLYANEAMTAAQWSGVQNITCFQESADLPCFHTGQDVLDKYSFNESNVY 638
            ::||.....|...:|::.:..|.:...|:|   ..|......:|....:|..:|.....:...:|
Human   584 LSSLWTVPAWISKVSFLRWCFEGLMKIQFS---RRTYKMPLGNLTIAVSGDKILSVMELDSYPLY 645

  Fly   639 RNLLAMVGLYFGFHLLGYYCL 659
            ...|.::||..||.:|.|..|
Human   646 AIYLIVIGLSGGFMVLYYVSL 666

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stNP_524108.1 ABCG_EPDR 66..298 CDD:213180 78/211 (37%)
3a01204 67..665 CDD:273361 176/606 (29%)
ABC2_membrane 395..600 CDD:279410 53/219 (24%)
ABCG8XP_011531331.1 ABCG_White 64..299 CDD:213201 78/211 (37%)
3a01204 92..667 CDD:273361 176/606 (29%)
ABC2_membrane 406..610 CDD:279410 53/219 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165141423
Domainoid 1 1.000 98 1.000 Domainoid score I7174
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53689
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
87.760

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