DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment st and ABCG5

DIOPT Version :9

Sequence 1:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_071881.1 Gene:ABCG5 / 64240 HGNCID:13886 Length:651 Species:Homo sapiens


Alignment Length:602 Identity:169/602 - (28%)
Similarity:285/602 - (47%) Gaps:70/602 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 QRMKRIINNSTGAIQPGTLMALMGSSGSGKTTLMSTLAFR-QPAGTVVQGDILINGR--RIGPFM 146
            |..::|:.:.:..::.|.:|.::||||||||||:..::.| ..|||.: |::.:|||  |...|.
Human    63 QWTRQILKDVSLYVESGQIMCILGSSGSGKTTLLDAMSGRLGRAGTFL-GEVYVNGRALRREQFQ 126

  Fly   147 HRISGYVYQDDLFLGSLTVLEHLNFMAHLRLDRRVSKEERRLIIKELLERTGLLSAAQTRIGS-- 209
            ...| ||.|.|..|.||||.|.|::.|.|.: ||.:....:..::.::....|...|...||:  
Human   127 DCFS-YVLQSDTLLSSLTVRETLHYTALLAI-RRGNPGSFQKKVEAVMAELSLSHVADRLIGNYS 189

  Fly   210 -GDDKKVLSGGERKRLAFAVELLNNPVILFCDEPTTGLDSYSAQQLVATLYELAQKGTTILCTIH 273
             |.    :|.|||:|::.|.:||.:|.::..||||||||..:|.|:|..|.|||::...::.|||
Human   190 LGG----ISTGERRRVSIAAQLLQDPKVMLFDEPTTGLDCMTANQIVVLLVELARRNRIVVLTIH 250

  Fly   274 QPSSQLFDNFNNVMLLADGRVAFTGSPQHALSFFANHGYYCPEAYNPADFLIGVLATDPGYEQAS 338
            ||.|:||..|:.:.:|:.|.:.|.|:|...|.||.:.||.|||..||.||.:.:.:.|   .|:.
Human   251 QPRSELFQLFDKIAILSFGELIFCGTPAEMLDFFNDCGYPCPEHSNPFDFYMDLTSVD---TQSK 312

  Fly   339 QRSAQHLCDQFAVSSAAKQ----RDMLVNLE--IHMAQSGNFPFDTEVESFRGVAWYKRFHVVWL 397
            :|..:.......:.||.|:    ...|.|:|  .|:......||.|  :...||  :.:..|:..
Human   313 EREIETSKRVQMIESAYKKSAICHKTLKNIERMKHLKTLPMVPFKT--KDSPGV--FSKLGVLLR 373

  Fly   398 RASLTLLRDPTIQWLRFIQKIAMA-FIIGACFAGTTEPSQLGVQAVQGALFIMISENTYHPMYSV 461
            |.:..|:|:......|.:|.:.|. |::.......:...:..:|...|.|:..:....|..|.:.
Human   374 RVTRNLVRNKLAVITRLLQNLIMGLFLLFFVLRVRSNVLKGAIQDRVGLLYQFVGATPYTGMLNA 438

  Fly   462 LNLFPQGFPLFMRETRSGLYSTGQYYAANILALLPGMIIEPLIFVIICYWLTGLRSTFYAFG--- 523
            :||||....:..:|::.|||...|...|..|.:||..::..:||..:|||..||......||   
Human   439 VNLFPVLRAVSDQESQDGLYQKWQMMLAYALHVLPFSVVATMIFSSVCYWTLGLHPEVARFGYFS 503

  Fly   524 ------------VTAMCVVLVMNVATACGCFFSTAFNSVPLAMAYLVPLDYIFMITSGIFIQVNS 576
                        :|.:.:.:|.|         ....||| :|:..:..:    ::.||....:..
Human   504 AALLAPHLIGEFLTLVLLGIVQN---------PNIVNSV-VALLSIAGV----LVGSGFLRNIQE 554

  Fly   577 LPVAFWWTQFLSWMLYANEAMTAAQWSGVQNITCFQESADLP-----CFHTGQDVLDK------- 629
            :|:.|....:.::..|.:|.:...::.|: |.||...:..:.     .|..|...::|       
Human   555 MPIPFKIISYFTFQKYCSEILVVNEFYGL-NFTCGSSNVSVTTNPMCAFTQGIQFIEKTCPGATS 618

  Fly   630 -YSFNESNVYRNLLAMV 645
             ::.|...:|..:.|:|
Human   619 RFTMNFLILYSFIPALV 635

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stNP_524108.1 ABCG_EPDR 66..298 CDD:213180 81/218 (37%)
3a01204 67..665 CDD:273361 169/602 (28%)
ABC2_membrane 395..600 CDD:279410 47/220 (21%)
ABCG5NP_071881.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..32
ABCG_White 50..275 CDD:213201 81/218 (37%)
3a01204 60..645 CDD:273361 169/602 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 98 1.000 Domainoid score I7174
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S3467
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
54.970

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