DRSC/TRiP Functional Genomics Resources

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Protein Alignment st and abcg1

DIOPT Version :9

Sequence 1:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_001103924.1 Gene:abcg1 / 556979 ZFINID:ZDB-GENE-070424-84 Length:673 Species:Danio rerio


Alignment Length:683 Identity:196/683 - (28%)
Similarity:336/683 - (49%) Gaps:77/683 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 DSKRIDVEAPERVEQHELQVMPVGSTIEVPSLDSTPKLSKRNSSERSLPLRSYSKWSPTEQGATL 69
            |.:.:.|...|.:..|.       |:.:.|.|.:..|..:.|.:|    .:.:| :.|......:
Zfish    32 DPRTVCVSIDEMMSNHV-------SSQQTPLLHAHLKKVENNLTE----AQRFS-YLPRRPAVNI 84

  Fly    70 VWRDLCVYTNVG------GSGQRMKRIINNSTGAIQPGTLMALMGSSGSGKTTLMSTLA-FRQPA 127
            .::||......|      |....:|.|..|.||    |.|:|:||.||:||:|||:.|| :|:  
Zfish    85 EFKDLSYSVPEGPWWRKKGYKTLLKGISGNFTG----GALVAIMGPSGAGKSTLMNILAGYRE-- 143

  Fly   128 GTVVQGDILING--RRIGPFMHRISGYVYQDDLFLGSLTVLEHLNFMAHLRLDRRVSKEERRLII 190
             |.::|:|||||  |.:..| .::|.|:.|||:.|..|||.|.:...|:|:|..:  .|.||.::
Zfish   144 -TGMKGEILINGHPRDLRSF-RKVSCYIMQDDMLLPHLTVQEAMMVSANLKLQEK--DEGRREMV 204

  Fly   191 KELLERTGLLSAAQTRIGSGDDKKVLSGGERKRLAFAVELLNNPVILFCDEPTTGLDSYSAQQLV 255
            :|:|...|||..|:||...      ||||:|||||.|:||:|||.::|.||||:||||.|..|:|
Zfish   205 REILTALGLLECAKTRTSH------LSGGQRKRLAIALELVNNPPVMFFDEPTSGLDSSSCFQVV 263

  Fly   256 ATLYELAQKGTTILCTIHQPSSQLFDNFNNVMLLADGRVAFTGSPQHALSFFANHGYYCPEAYNP 320
            :.:..|||.|.|::|||||||:::|:.|:.:.:|:.|:..:.|.....:.:..:.|..||..:||
Zfish   264 SLMKALAQGGRTVICTIHQPSAKVFELFDKLYVLSQGQCIYRGKVSSLIPYLRDLGLSCPTYHNP 328

  Fly   321 ADFLIGVLATDPGYEQASQRSA--QHLCDQFAVSSAAKQRDMLVNLE---IHMAQSGNFPFDTEV 380
            |||::.|.:.:.|.:.|....|  :|.|          ::|....:.   :|.....:.|.|.|.
Zfish   329 ADFIMEVASGEYGDQTARLVKAVQEHKC----------EKDYKTEMNGNGVHNPFLWHRPSDEES 383

  Fly   381 ESFRG-----VAWYKRFHVVWLRASLTLLRDPTIQWLRFIQKIAMAFIIGACFAGTTEPSQLGVQ 440
            .|..|     .:...:|.:::.|..|:::||..:..||.:..:.:..:||..:.|....:: .|.
Zfish   384 SSSEGCHSFSASCLTQFCILFKRTFLSIMRDSVLTHLRIMSHLGIGILIGLLYLGIGNEAK-KVL 447

  Fly   441 AVQGALFIMISENTYHPMYSVLNLFPQGFPLFMRETRSGLYSTGQYYAANILALLPGMIIEPLIF 505
            :..|.||..:....:..:...:..||....:|:||..:..||...||.|..:|.:|..|:.|:.:
Zfish   448 SNSGFLFFSMLFLMFAALMPTVLTFPLEMGVFLREHLNYWYSLKAYYLAKTMADVPFQIVFPVAY 512

  Fly   506 VIICYWLTGLRSTFYAFGVTAMCVVLVMNVATACGCFFSTAFNSVPLAMAYLVPLDYI-FMITSG 569
            ..|.||:|...|....|.:......|...||.:.|.....|..|:.:| .::.|:..| .::.||
Zfish   513 CSIVYWMTSQPSDAVRFILFLALGTLTSLVAQSLGLLIGAASTSLQVA-TFVGPVTAIPVLLFSG 576

  Fly   570 IFIQVNSLPVAFWWTQFLSWMLYANEAMTAAQWSGVQNITCFQESADLPC-------FHTGQDVL 627
            .|:..:::|....|..::|::.|..|.:..:.:.        .:..||.|       |...:.:|
Zfish   577 FFVSFDTIPKYLQWISYISYVRYGFEGVILSIYG--------LDREDLHCDKDETCHFQKSEAIL 633

  Fly   628 DKYSFNESNVYRNLLAMVGLYF-GFHLLGYYCL 659
            .:....::.:|.:.: ::|::| ...|:.|:.|
Zfish   634 KELDVEDAKLYMDFI-VLGIFFISLRLIAYFVL 665

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stNP_524108.1 ABCG_EPDR 66..298 CDD:213180 100/240 (42%)
3a01204 67..665 CDD:273361 184/621 (30%)
ABC2_membrane 395..600 CDD:279410 50/205 (24%)
abcg1NP_001103924.1 3a01204 67..673 CDD:273361 187/641 (29%)
ABCG_EPDR 81..306 CDD:213180 100/240 (42%)
ABC2_membrane 403..605 CDD:279410 50/203 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170574356
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.750

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