DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment st and CG31121

DIOPT Version :9

Sequence 1:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_733058.1 Gene:CG31121 / 42975 FlyBaseID:FBgn0051121 Length:911 Species:Drosophila melanogaster


Alignment Length:618 Identity:149/618 - (24%)
Similarity:246/618 - (39%) Gaps:155/618 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 SPTEQGATLVWRDL---CVYTNVGGSGQRMKRIINNSTGAIQPGTLMALMGSS---GSGKTTLMS 119
            |..:.|..|::.::   |:..|....|..|:         .:.|.|.|:|.:|   ||.....::
  Fly   295 SRKQSGMGLIYPNIQVHCLDVNPCLRGVSMQ---------AKAGDLFAIMATSQREGSALAECLA 350

  Fly   120 TLAFRQPAGTVVQGDILINGRRIG-PFMHRISGYVYQDDLFLGSL----TVLEHLNFMAHLR--L 177
            .|..|      :.|:|||||:::. ..:..:..||  ..|.:.||    :|...|||.|.||  :
  Fly   351 GLTER------LGGEILINGQQVSRRGLRELCSYV--PALEVSSLDPRMSVQCTLNFHAALRGPI 407

  Fly   178 DRRVSKEERRLIIKELLERTGLLSAAQTRIGSGDDKKVLSGGERKRLAFAVELLNNPVILFCDEP 242
            ||...:|...::|::|    ||.:...:.:.:      |:..|::||:.|.:||....:|..|:.
  Fly   408 DRSDLEERMDVLIEDL----GLNTVRASNVST------LTHSEKQRLSVACQLLAQSSLLILDQV 462

  Fly   243 TTGLDSYSAQQLVATLYELAQKGTTILCTIHQPSSQLFDNFNNVMLLADGRVAFTGS----PQHA 303
            |:.:|.:....||..|.:....|..::.|:..|:.::....:.|:||:.||..|:||    |:| 
  Fly   463 TSNMDIFDTFFLVEYLRQWCSGGRIVIMTLQPPTFEILSMCSGVLLLSGGRTVFSGSRADLPRH- 526

  Fly   304 LSFFANHGYYCPEAYNPADFLIGVLATDPGYEQASQRSAQHLCDQFA-VSSAAKQRDMLVNLEIH 367
               ....||.||...||||:.:.::..|       ..||..:.:..| :.|.|...|.:.:....
  Fly   527 ---MGELGYPCPPFKNPADYYLDLVTLD-------DLSAAAMLESSARIESLANAWDQINSEPPL 581

  Fly   368 MAQSGNFPFDTEVESFRG--VAWYKRFHVVWLRASLTLLRDPTIQWL-RFIQKIAMAFIIGACF- 428
            .|...:.|..|....|.|  .|..|||.......||       :.|: :.|....::..||..| 
  Fly   582 AAPPASLPNFTMKAGFFGQISALIKRFAGYKQPGSL-------LTWISKLIAAAVLSLFIGCIFW 639

  Fly   429 -AGTTEPSQLGVQAVQGALFIMISENTYHPMYSVLNLFPQGFPLFM--------------RETRS 478
             ...::| ||......|          ||....||..    :||.|              |:.|.
  Fly   640 DVPASDP-QLSYHDRLG----------YHHCVMVLVY----WPLVMLTIRDTQEDRRHAERDIRL 689

  Fly   479 GLYSTGQYYAANILALLPGMIIEPL--IFVIICYWLTGLRSTFYAFGVTAMCVVLVMNVATACGC 541
            |||:...|           :|::.|  :|..:|.||.      |.....:|..:...:.::..|.
  Fly   690 GLYTRSLY-----------IIVQSLLGLFPSLCIWLA------YLLPAHSMAGLYTYSNSSDTGI 737

  Fly   542 F--------FSTAFNSVPLAMAYLVPLDYIFMITSGIFIQVNSLPVA--------------FW-W 583
            :        :.|...::.|..|:|:|......|.:|:.    ||.||              || |
  Fly   738 YLYMGYMLLYLTLIQTLALFCAHLLPCKVSASIVNGLI----SLAVAAVGGYLVHPQNLAQFWSW 798

  Fly   584 TQFLS---WML-------YANEAMTAAQWSGVQ 606
            .||:|   |:|       |:.|  |.:..:|:|
  Fly   799 LQFVSPERWLLPVLVQDEYSAE--TLSNSAGLQ 829

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stNP_524108.1 ABCG_EPDR 66..298 CDD:213180 63/244 (26%)
3a01204 67..665 CDD:273361 147/612 (24%)
ABC2_membrane 395..600 CDD:279410 55/256 (21%)
CG31121NP_733058.1 P-loop_NTPase 319..518 CDD:304359 59/225 (26%)
cbiO 319..491 CDD:130234 51/198 (26%)
ABC2_membrane 621..809 CDD:279410 48/223 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45438911
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR48041
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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