DRSC/TRiP Functional Genomics Resources

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Protein Alignment st and CG11147

DIOPT Version :9

Sequence 1:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_608954.1 Gene:CG11147 / 33803 FlyBaseID:FBgn0031734 Length:711 Species:Drosophila melanogaster


Alignment Length:743 Identity:143/743 - (19%)
Similarity:266/743 - (35%) Gaps:219/743 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    82 GSGQRMKRIINNSTGAIQPGTLMALMGSSGSGKTTLMSTLAFRQPAGTVVQGDILINGRRIGPFM 146
            ||....|.::|.....:..|::..|:|:||.|||||:|.:..::   .:..|::::.|.:.|...
  Fly    14 GSKSNPKIVLNQLNMNVMRGSIYGLLGASGCGKTTLLSCIVGQR---RLNGGEVVVLGAKPGEPG 75

  Fly   147 HRIS----GYVYQDDLFLGSLTVLEHLNFMAHL--RLDRRVSKEERRLIIKELLERTGLLSAAQT 205
            ..:.    |::.|:...:..:||.|.:.:...:  ..|.|:  .|:..::||||:    |..|:.
  Fly    76 SGVPGSRVGFMPQEIALVEEMTVKETIFYFGRIYGLTDERI--REKFKLLKELLQ----LPPARQ 134

  Fly   206 RIGSGDDKKVLSGGERKRLAFAVELLNNPVILFCDEPTTGLDSYSAQQLVATLYELAQKG-TTIL 269
            .|      |..|||:::||:||..::::|.:|..||||.|||....:::...|.|..:.. ..::
  Fly   135 MI------KQCSGGQQRRLSFACAMIHDPELLILDEPTVGLDPMLREKIWDFLVETTRNSKLAVI 193

  Fly   270 CTIH--QPSSQLFDNFNNVMLLADGRVAFTGSPQHALSFFANHGYYCPEAYNPADFLIGVLATDP 332
            .|.|  :.:.|.    |.:.|:.:|.:....:|.:.:..|..      ::...| |||  |:...
  Fly   194 ITTHYIEEAKQA----NCIGLMRNGVLLAEDTPTNIMIKFGT------QSIEDA-FLI--LSQRQ 245

  Fly   333 GYEQASQRSAQHLCDQFAVSSAAKQRDMLVNLEIHMAQSGNFPFDTE------------------ 379
            |.|....:...|..:| |:.:|....:::...|.:|.:....||:..                  
  Fly   246 GNEDELAQIMDHNKNQ-ALPAAVLPPEVIDTHEPNMPEKQPIPFEEPLNENRKKIFFTTKGRVKA 309

  Fly   380 ------VESFR---GVAWYKRFHVVWLRA-------------------------------SLTLL 404
                  |:.||   |:.:...|.::.|..                               .:|:.
  Fly   310 LMTKNFVQLFRQPSGIIFMLLFPIIQLTCFYLAIGKTPTNLEIGVYSGEVENYGECFDENLVTVY 374

  Fly   405 RD------------------------------------------PTIQWLRFIQKIAMAFIIGAC 427
            :|                                          .|:.:|.|.|..:.:.:    
  Fly   375 KDSDNESCLFNKLSCRYIRVLGDDVATRKYYASEADALNDAKRATTVGYLHFAQNFSDSIL---- 435

  Fly   428 FAGTTEPSQLGVQAVQGA-----LFIMISENTYHPMYSVLNLFPQGFPLFMRE-TRSGLYSTG-- 484
                 ...:.|:.:..||     |.|.|........|.:.......|..|||. .:....||.  
  Fly   436 -----SVMEDGIHSSDGAVDHAELSIHIDMTDQQVAYFMQRKLRDKFSTFMRSVVKDCNVSTAIV 495

  Fly   485 ------------------QYYAANILALLPGMIIEPLIFVIIC-------------YW----LTG 514
                              |.|.|      ||:::..:.|:...             .|    |.|
  Fly   496 DLPVQFQEPIFGSTDIEFQQYCA------PGVVMTMVFFLATLMTAAVFISERMDGIWDRTLLAG 554

  Fly   515 LRST--FYAFGVTAMCVVLVMN--VATACGCFFSTAFNSVPLAMAYLVPLDYIFMITSGIFIQV- 574
            :.:|  .:|..:|.:.::.:.:  |....|..|.|..|.....:..|:.|.....:..|:||.| 
  Fly   555 VSATEMLWAHLLTQLIIMALQSFEVIMYIGLVFDTYNNGDTTTLIGLLTLTAFCGMLFGLFISVF 619

  Fly   575 -------NSLPV-AFWWTQFLSWMLYANEAMTAAQWSGVQNITCFQESADLPCFHTGQDVLDK-Y 630
                   |.:.. ||:....|..:|:..|:|.    ..:|::....... :|.. :.::|::| :
  Fly   620 CKSHTEANFVATGAFYPMIILCGLLWPLESMP----QFLQDLVMVLPFT-IPSI-SARNVIEKGW 678

  Fly   631 SFNESNVYRNLLAMVG---LYFGFHLLG 655
            |.....||...|.|.|   ::|...|:|
  Fly   679 SITHEKVYNGFLVMAGWTIIFFVLCLIG 706

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stNP_524108.1 ABCG_EPDR 66..298 CDD:213180 58/224 (26%)
3a01204 67..665 CDD:273361 143/743 (19%)
ABC2_membrane 395..600 CDD:279410 50/333 (15%)
CG11147NP_608954.1 CcmA 1..282 CDD:224054 73/296 (25%)
P-loop_NTPase 4..222 CDD:304359 58/226 (26%)
ABC2_membrane_3 322..702 CDD:289468 63/400 (16%)
ABC2_membrane 469..664 CDD:279410 37/204 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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