DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment st and Atet

DIOPT Version :10

Sequence 1:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_523471.2 Gene:Atet / 33636 FlyBaseID:FBgn0020762 Length:832 Species:Drosophila melanogaster


Alignment Length:829 Identity:199/829 - (24%)
Similarity:345/829 - (41%) Gaps:206/829 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 EAPERVEQHELQVMPVG----------STIEVPSLDSTPK-LSKRNSSERSLPLRSYSK-WSPTE 64
            ::|.||........|..          ||:...|.:..|. .:..||.:..:||.|..| .:..:
  Fly    26 KSPNRVSDSAATTAPNAVLYTSGNMSLSTLSTGSGNPNPNPNASTNSRQEPVPLLSQLKLTNDLK 90

  Fly    65 QGATLVWRDLC--------------VYTNVGGS--GQR--------------------------- 86
            |.:.....:||              |..|.|||  ||:                           
  Fly    91 QNSHGSQNNLCNGGLGSNNHALAPKVANNSGGSPNGQKKGTIALSHLPQRPPVDIEFCDISYSVT 155

  Fly    87 ------MKRIINNSTGAIQPGTLMALMGSSGSGKTTLMSTLAFRQPAGTVVQGDILING--RRIG 143
                  .|.|:.:.:|..:.|.:.|:||.||:||:|||:.||..:.|  .:.|.:|||.  |.:.
  Fly   156 DSHRRGFKTILKSVSGKFRNGEITAIMGPSGAGKSTLMNILAGYKTA--QLSGSVLINSKERNLR 218

  Fly   144 PFMHRISGYVYQDDLFLGSLTVLEHLNFMAHLRLDRRVSKEERRLIIKELLERTGLLSAAQTRIG 208
            .| .::|.|:.|||:.:.:|||.|.:...|:|:|.:.:....:.::::|:||..||..:..|...
  Fly   219 RF-RKLSCYIMQDDVLIANLTVREAMMVAANLKLGKNMISYAKVVVVEEILETIGLKESVNTLTC 282

  Fly   209 SGDDKKVLSGGERKRLAFAVELLNNPVILFCDEPTTGLDSYSAQQLVATLYELAQKGTTILCTIH 273
            :      ||||:||||:.|:||:|||.::|.||||:||||.:..||::.|..||:.|.||:||||
  Fly   283 N------LSGGQRKRLSIALELVNNPPVMFFDEPTSGLDSSTCFQLISLLRSLARGGRTIVCTIH 341

  Fly   274 QPSSQLFDNFNNVMLLADGRVAFTGSPQHALSFFANHGYYCPEAYNPADFLIGVLATDPGYEQAS 338
            |||::||:.|:::.|||.|:..:.|..:..:.:.::.||.||..:||||:::.|.:.:.|     
  Fly   342 QPSARLFEKFDHLYLLAQGQCVYEGRVKGLVPYLSSLGYECPSYHNPADYVLEVASGEYG----- 401

  Fly   339 QRSAQHLCDQFAVSSAAKQRDMLVNLEIHMAQSG------------------------------- 372
             .:...|.|  ||.|.|.::....:..:.:||.|                               
  Fly   402 -DAVPKLVD--AVKSGACKKYAHKDYVLTLAQKGCNNDIIKGSGSGAENAMAILTLEDEKPPLED 463

  Fly   373 -----NFPFDTEVE---------------------------------SFRG-------------- 385
                 :.|.|...|                                 |.:|              
  Fly   464 RQLEPSIPVDDPAELKPPKLETQQSQNSDCSVVNMPTNAVDDSCSFSSSKGTQNAVGGSGSGGPS 528

  Fly   386 --------------------------VAWYKRFHVVWLRASLTLLRDPTIQWLRFIQKIAMAFII 424
                                      .:.:.:|.::..|:..|:|||..:..:|....:.:..||
  Fly   529 AVVGCMTSLLDSHESVVTLPNKTGFPTSGWTQFWILLKRSFRTILRDKMLTHMRLFSHVIVGAII 593

  Fly   425 GACFAGT-TEPSQLGVQAVQGALFIMISENTYHPMYSVLNLFPQGFPLFMRETRSGLYSTGQYYA 488
            |..:... .|.|::...|  |.:|.:....|:..|...:..||....:|:||..:..||...:|.
  Fly   594 GMIYYDVGNEASKIMSNA--GCIFFVSLFTTFTAMMPTILTFPTEMSVFVREHLNYWYSLKAFYF 656

  Fly   489 ANILALLPGMIIEPLIFVIICYWLTGLRSTFYAFGVTAMCVVLVMNVATACGCFFSTAFN---SV 550
            |..:|.:|..|:...::|::.|:||..........:..:..||...||.:.|.......|   .|
  Fly   657 AKTIADMPFQIVFSSVYVLVVYYLTSQPMELERVSMFVLICVLNSLVAQSLGLLIGAGMNIETGV 721

  Fly   551 PLAMAYLVPLDYIFMITSGIFIQVNSLPVAFWWTQFLSWMLYANE-AMTAAQWSGVQNITCFQES 614
            .|.....:|.    ::.||.|:..:::|....|..::|::.|..| ||.|........:.|.|  
  Fly   722 FLGPVTTIPT----ILFSGFFVNFDTIPGYLQWVTYVSYVRYGFEGAMVAIYGMDRAKMQCNQ-- 780

  Fly   615 ADLPC-FHTGQDVLDKYSFNESNVYRNLLAMVGLYFGFHLLGYYCL-WR 661
              :.| :...:..|::.|.:.:..:.:.:|::|::|...::.|:.| |:
  Fly   781 --MYCHYRVPKKFLEEMSMDNALFWVDAVALIGIFFALRIIAYFVLRWK 827

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stNP_524108.1 3a01204 67..665 CDD:273361 184/762 (24%)
AtetNP_523471.2 3a01204 137..825 CDD:273361 173/714 (24%)

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