DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment st and CG9664

DIOPT Version :9

Sequence 1:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_722889.1 Gene:CG9664 / 33540 FlyBaseID:FBgn0031515 Length:609 Species:Drosophila melanogaster


Alignment Length:601 Identity:179/601 - (29%)
Similarity:296/601 - (49%) Gaps:62/601 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 IINNSTGAIQPGTLMALMGSSGSGKTTLMSTLAFRQPAGTVVQGDILINGR-RIGPFMHRISGYV 153
            |||.:.|..:.|.|.|::|.||:||:||::.||..:..|  |.|..|:||| |......::|.|:
  Fly    42 IINEACGVFKSGRLTAILGPSGAGKSTLLNALAGFKLQG--VTGQFLLNGRPRDIMSFRKMSAYI 104

  Fly   154 YQDDLFLGSLTVLEHLNFMAHLRLDRRVSKEERRLIIKELLERTGLLSAAQTRIGSGDDKKVLSG 218
            .|:.:.|..|||.|.|.....|::....:.:|::.||.::::...|.|..:|.:      |.|||
  Fly   105 AQNFVMLNLLTVEETLRVSTDLKMPSSTAAQEKQKIIDDIIDILQLQSCRRTLV------KNLSG 163

  Fly   219 GERKRLAFAVELLNNPVILFCDEPTTGLDSYSAQQLVATLYELAQKGTTILCTIHQPSSQLFDNF 283
            ||.|||:..:||:.||.|:|.||||:|||...:.|::..|..||..|..::|.:|||.|:||..|
  Fly   164 GEHKRLSIGIELVTNPPIMFFDEPTSGLDCVGSYQVICHLQRLAHDGRIVVCVVHQPGSRLFQLF 228

  Fly   284 NNVMLLADGRVAFTGSPQHALSFFANHGYYCPEAYNPADFLIGVLATDPGYEQASQRSAQHLCDQ 348
            ::|::||.|.|.:.|..:..|..||..|:.||:.||||||.:         |..||.|....|:.
  Fly   229 DDVLVLAHGEVLYAGEQREMLPTFAQSGHICPQYYNPADFAL---------EVCSQSSTTERCES 284

  Fly   349 FAV------SSAAKQRDMLVNLEIHMAQSGNFPFDTEVESFRG---VAWYKRFHVVWLRASLTLL 404
            ...      |:|:....:.|:.|..:........|  :...||   |.::.:..|:..|...::.
  Fly   285 LITQNKMMHSTASNVVKLQVDEETALIDVHKDALD--LSHLRGKEQVGFWTQLSVLLRRHLRSMS 347

  Fly   405 RDPTIQWLRFIQKIAMAFIIGACFAGTTEPSQLGVQAVQGALFIMISENTYHPMYSVLNLFPQGF 469
            ||.....:|.:..:.:|.::|..:......:|..|..|....|:::.....:.|.|:| |..|..
  Fly   348 RDMFAVQMRLVMHVVVALLLGVVYWQIGGDAQKIVSNVSCLFFVILFVFAGNAMPSIL-LCMQDS 411

  Fly   470 PLFMRETRSGLYSTGQYYAANILALLPGMIIEPLIFVIICYWLTGLRSTFYAFGVT-AMCVVLVM 533
            .:|:||..:|.||.|.||.:.:||.||..:..|.:|:.|.|::||....|..|.:. |:||:...
  Fly   412 AVFIREYYNGWYSLGAYYLSKVLADLPLQLTCPTMFISIGYFMTGQPPEFQRFAMCWALCVMTAF 476

  Fly   534 NVATACGCFFSTAFNSVPLAMAYLVPLDYI-FMITSGIFIQVNSLPVAFWWTQ---FLSWMLYAN 594
             :....|....:.| ::.||: :|||...| |::.||.||::|.|.   |:.:   .:|:..|..
  Fly   477 -IGHFIGVIAGSLF-TMQLAI-FLVPSATIPFLLFSGFFIRLNELS---WFLRPICDVSFFRYIF 535

  Fly   595 EAMTAAQWSGVQNITCFQESADLPC--------FHTGQDVLDKYSFNESNVYRNLLAMVGLYFGF 651
            |.:..|.:.        .:..:|.|        :.|.:..|..:.. |.|.:...:|::|::...
  Fly   536 EGLMRAIYG--------YDRGELECYATSNFCYYRTAEQFLKDFQM-EGNEFDWDMAVLGIFLIL 591

  Fly   652 HLLGYY----CLWRRA 663
            .||.::    .:.|||
  Fly   592 LLLAFFVTLNAVIRRA 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stNP_524108.1 ABCG_EPDR 66..298 CDD:213180 80/208 (38%)
3a01204 67..665 CDD:273361 179/601 (30%)
ABC2_membrane 395..600 CDD:279410 58/209 (28%)
CG9664NP_722889.1 ABCG_EPDR 20..243 CDD:213180 80/208 (38%)
EcfA2 23..247 CDD:224047 81/212 (38%)
ABC2_membrane 338..539 CDD:279410 58/207 (28%)
YadH <388..547 CDD:223912 50/173 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 1 1.000 - - mtm14984
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR48041
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
76.920

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