DRSC/TRiP Functional Genomics Resources

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Protein Alignment st and CG17646

DIOPT Version :9

Sequence 1:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_608618.1 Gene:CG17646 / 33354 FlyBaseID:FBgn0264494 Length:766 Species:Drosophila melanogaster


Alignment Length:666 Identity:171/666 - (25%)
Similarity:276/666 - (41%) Gaps:116/666 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 KRIINNSTGAIQPGTLMALMGSSGSGKTTLMSTLA-FRQPAGTVVQGDILINGRRIGPFMHRISG 151
            |.|::...|:.:.|.|.|:||.||:||:||::.:: |   ..|.|.|||.:|.:.:.|...|...
  Fly   128 KEILHGLNGSFRSGELTAIMGPSGAGKSTLLNVMSGF---CSTGVSGDIRVNRKPMAPSSERFRQ 189

  Fly   152 ---YVYQDDLFLGSLTVLEHLNFMAHLRLDRRVSKEERRLIIKELLERTGLLSAAQTRIGSGDDK 213
               |::||||....|.|.|.:...|||:|..:|:|..:..:||.:|...||........|.    
  Fly   190 MLCYIHQDDLLRPQLLVGEIMLLAAHLKLGFKVTKAYKMDLIKHILSLLGLDHRYNVPTGK---- 250

  Fly   214 KVLSGGERKRLAFAVELLNNPVILFCDEPTTGLDSYSAQQLVATLYELAQKGTTILCTIHQPSSQ 278
              ||||::||||.|:||::||.:|:.|||||||||.|....||.|.:||.:|.||:|||||||:.
  Fly   251 --LSGGQKKRLAIALELISNPPVLYLDEPTTGLDSSSCSSCVALLKKLASQGHTIVCTIHQPSAL 313

  Fly   279 LFDNFNNVMLLADGRVAFTGSPQHALSFFANHGYYCPEAYNPADFLIGV--------------LA 329
            :|:.|:.:..:.||...:.|..:..:.|.|:....||..:||||:|:.|              .|
  Fly   314 IFEMFDKLYTVVDGHCMYQGPVRELVPFLADQQLVCPSYHNPADYLLEVAVGEHQRDLNELIHAA 378

  Fly   330 TDPGYE------------------------------QASQRSAQHLCDQFAVSSAAKQRDMLVNL 364
            ....||                              :.|:..|.....||:.....|.....:.|
  Fly   379 NKKYYEDVDRHRYMSSDDMARLVESIKENMGGKAVVKTSEALAAFAAAQFSSFDYVKPSPQELAL 443

  Fly   365 EIHMAQSGNFPFDTEVE------------------------SFRGVAWYKRFHVVWLRASLTLLR 405
            |...|.||. |...:.:                        :.|..::..::.::..|..:...|
  Fly   444 EEIKALSGG-PESADPDLLEKNLRPQPQPLAKAGELARPPNAIRSASFLMQYVLLMQRILICAKR 507

  Fly   406 DPTIQWLRFIQKIAMAFIIGACF--AGTTEPSQLGVQA-VQGALFIMISENTYHPMYSVLNLFPQ 467
            :..:...|....|.:..:.|..:  .|....|.||... :.|:..:::    |....:|:..||.
  Fly   508 NYFLLLARIFSHIFIGVVFGYLYMNVGNNAQSVLGNYVYLYGSTLLLV----YTGKMAVVLTFPL 568

  Fly   468 GFPLFMRETRSGLYSTGQYYAANILALLPGMIIEPLIFVIICYWLTGLRST----FYAFGVTAMC 528
            ...:..||..:..|..|.|:.:.|...:|...:...:::||...|||..:|    .|.|    |.
  Fly   569 EIDMLTREHFNRWYKLGPYFLSLISFEIPFQSLCTAMYIIISVHLTGNDATDSFRIYYF----ML 629

  Fly   529 VVLVMNVATACGCFFSTAFNSVPLAMA-YLVPLDYIFMITSGIFIQVNSLPVAFWWTQFLSWMLY 592
            :.::.:::.....||..|  ::|..:| :|.|:..:.....|...:...:...|.|...||:.  
  Fly   630 LGIMASLSAQAWGFFVGA--TLPTKLAVFLGPILAVMFSVFGFCTRYIDITPLFRWMWHLSYF-- 690

  Fly   593 ANEAMTAAQWSGVQNITCFQESADLPCFHTGQ-------DVLDKYSFNESNVYRNLLAMVGLYFG 650
                  .|.:.|..|.....:...|.|..|..       .|..||.........:.|.::|:..|
  Fly   691 ------RAGFHGALNAIYGMDRPFLECPETAMYCHFRSPKVFLKYMMISDVHMSDCLILMGIVIG 749

  Fly   651 -FHLLGYYCLWRRARK 665
             .|:|....||.:..|
  Fly   750 VMHVLTLITLWHKLNK 765

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stNP_524108.1 ABCG_EPDR 66..298 CDD:213180 86/213 (40%)
3a01204 67..665 CDD:273361 170/664 (26%)
ABC2_membrane 395..600 CDD:279410 42/212 (20%)
CG17646NP_608618.1 ABCG_EPDR 103..333 CDD:213180 86/213 (40%)
3a01204 123..765 CDD:273361 170/664 (26%)
ABC2_membrane 497..698 CDD:279410 44/218 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 1 1.000 - - mtm14984
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR48041
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
76.920

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