Protein Alignment st and Abca1

DIOPT Version :9

• Sequence 1: NP_524108.1
• Gene: st / 39836
• FlyBaseID: FBgn0003515
• Length: 666
• Species: Drosophila melanogaster
• Sequence 2: XP_038965774.1
• Gene: Abca1 / 313210
• RGDID: 631344
• Length: 2263
• Species: Rattus norvegicus
• Alignment Length: 359
• Identity: 86/359 - (23%)
• Similarity: 156/359 - (43%)
• Gaps: 57/359 - (15%)

  Fly    85 QRMKRIINNSTGAIQPGTLMALMGSSGSGKTTLMSTLAFRQPAG--TVVQGDILINGRRIGPFMH 147
            ::.|..::.....|.||....|:|.:|:|||:     .|:...|  .|.:||.|:|...|...:|
  Rat  1925 RKRKPAVDRICVGIPPGECFGLLGVNGAGKTS-----TFKMLTGDTAVTRGDALLNKNSILSNIH 1984

  Fly   148 RI---SGYVYQDDLFLGSLTVLEHLNFMAHLRLDRRVSKEERRLIIKELLERTGLLSAAQTRIGS 209
            .:   .||..|.|.....||..|||.|.|.|   |.|.::|...:.:..:.:.||:...:....:
  Rat  1985 EVHQNMGYCPQFDAITELLTGREHLEFFALL---RGVPEKEVGKVGEWAIRKLGLVKYGEKYASN 2046

  Fly   210 GDDKKVLSGGERKRLAFAVELLNNPVILFCDEPTTGLDSYSAQQLVATLYELAQKGTTILCTIHQ 274
                  .|||.:::|:.|:.|:..|.::|.||||||:|..:.:.|......:.::|.:::.|.|.
  Rat  2047 ------YSGGNKRKLSTAIALIGGPPVVFLDEPTTGMDPKARRFLWNCALSIIKEGRSVVLTSHS 2105

  Fly   275 PSSQLFDNFNNVMLLADGRVAFTGSPQHALSFFANHGYYC--------PEAYNPADFLIGVLATD 331
             ..:.......:.::.:||....||.||..:.|.: ||..        |: ..|.....|:  ..
  Rat  2106 -MEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGD-GYTIVVRIAGSNPD-LKPVQEFFGL--AF 2165

  Fly   332 PG------------YEQASQRSAQHLCDQFAVSSAAKQRDMLVNLEIHMAQSG-------NFPFD 377
            ||            |:..|..|:  |...|::.|.:|:|   :::|.:.....       ||..|
  Rat  2166 PGSVLKEKHRNMLQYQLPSSLSS--LARIFSILSQSKKR---LHIEDYSVSQTTLDQVFVNFAKD 2225

  Fly   378 -TEVESFRGVAWYKRFHVVWLRASLTLLRDPTIQ 410
             ::.:..:.::.:|...||.:....:.|:|..::
  Rat  2226 QSDDDHLKDLSLHKNQTVVDVAVLTSFLQDEKVK 2259

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
st	NP_524108.1	ABCG_EPDR	66..298	CDD:213180	57/217 (26%)
		3a01204	67..665	CDD:273361	86/359 (24%)
		ABC2_membrane	395..600	CDD:279410	3/16 (19%)
Abca1	XP_038965774.1	rim_protein	1..2238	CDD:130324	81/336 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	1	1.000