DRSC/TRiP Functional Genomics Resources

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Protein Alignment st and Abcg2

DIOPT Version :10

Sequence 1:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_852046.1 Gene:Abcg2 / 312382 RGDID:631345 Length:657 Species:Rattus norvegicus


Alignment Length:609 Identity:179/609 - (29%)
Similarity:301/609 - (49%) Gaps:61/609 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 KRIINNSTGAIQPGTLMALMGSSGSGKTTLMSTLAFRQ-PAGTVVQGDILINGRRIGPFMHRISG 151
            |.|:::..|.::|| |.|::|.:|.||::|:..||.|: |.|  :.||:||||..........||
  Rat    60 KEILSDINGIMKPG-LNAILGPTGGGKSSLLDVLAARKDPRG--LSGDVLINGAPQPANFKCSSG 121

  Fly   152 YVYQDDLFLGSLTVLEHLNFMAHLRLDRRVSKEERRLIIKELLERTGLLSAAQTRIGSGDDKKVL 216
            ||.|||:.:|:|||.|:|.|.|.|||.:.:...|:...|..:::..||...|.:::|: ...:.:
  Rat   122 YVVQDDVVMGTLTVRENLQFSAALRLPKAMKTHEKNERINTIIKELGLDKVADSKVGT-QFTRGI 185

  Fly   217 SGGERKRLAFAVELLNNPVILFCDEPTTGLDSYSAQQLVATLYELAQKGTTILCTIHQPSSQLFD 281
            |||||||.:..:||:.:|.|||.|||||||||.:|..::..|..::::|.||:.:||||...:|.
  Rat   186 SGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQGRTIIFSIHQPRYSIFK 250

  Fly   282 NFNNVMLLADGRVAFTGSPQHALSFFANHGYYCPEAYNPADFLIGVLATDPGYEQASQRSAQHLC 346
            .|:::.|||.|::.|.|..|.||.:||:.||:|....|||||.:.|:..|......::....|..
  Rat   251 LFDSLTLLASGKLMFHGPAQKALEYFASAGYHCEPYNNPADFFLDVINGDSSAVMLNRGEQDHEA 315

  Fly   347 DQFAVSSAAKQRDMLVNL------------------EIHMAQ----SGNFPFDTEVESF-RGVAW 388
            :: ....:.:::.::.||                  ::.:||    |..|.....|.|| ..:.|
  Rat   316 NK-TEEPSKREKPIIENLAEFYINSTIYGETKAELDQLPVAQKKKGSSAFREPVYVTSFCHQLRW 379

  Fly   389 YKRFHVVWLRASLTLLRDPTIQWLRFIQKIAMAFIIGACFAG-TTEPSQLGVQAVQGALFIMISE 452
            ..|      |:...||.:|.....:.|..:.:..||||.:.| ..:|:  |:|...| :|..::.
  Rat   380 IAR------RSFKNLLGNPQASVAQLIVTVILGLIIGALYFGLKNDPT--GMQNRAG-VFFFLTT 435

  Fly   453 NTYHPMYSVLNLFPQGFPLFMRETRSGLYSTGQYYAANILA-LLPGMIIEPLIFVIICYWLTGLR 516
            |......|.:.||.....||:.|..||.|....|:...::: |||...:..:|:..:.|::.||:
  Rat   436 NQCFTSVSAVELFVVEKKLFIHEYISGYYRVSSYFFGKLVSDLLPMRFLPSVIYTCLLYFMLGLK 500

  Fly   517 STFYAFGVTAMCVVLV------MNVATACGCFFSTAFNSVPLAMAYLVPLDYIF-MITSGIFIQV 574
            .|..||.:....:::|      |.:|.|.|       .||......|:.:.::| |:.||:.:.:
  Rat   501 RTVEAFFIMMFTLIMVAYTASSMALAIAAG-------QSVVSVATLLMTISFVFMMLFSGLLVNL 558

  Fly   575 NSLPVAFWWTQFLSWMLYANEAMTAAQWSGVQ-----NITCFQESADLPCFHTGQDVLDKYSFNE 634
            .::.....|.|:.|...|...|:...::.|.:     |:|......:.....||.|.|.....:.
  Rat   559 RTIGPWLSWLQYFSIPRYGFTALQHNEFLGQEFCPGLNVTMNSTCVNSYTICTGNDYLINQGIDL 623

  Fly   635 S--NVYRNLLAMVGLYFGFHLLGY 656
            |  .::||.:|:..:...|..:.|
  Rat   624 SPWGLWRNHVALACMIIIFLTIAY 647

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stNP_524108.1 3a01204 67..665 CDD:273361 179/609 (29%)
Abcg2NP_852046.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25
3a01204 46..651 CDD:273361 179/609 (29%)
Blue background indicates that the domain is not in the aligned region.

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