Sequence 1: | NP_524108.1 | Gene: | st / 39836 | FlyBaseID: | FBgn0003515 | Length: | 666 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001101191.1 | Gene: | Abca4 / 310836 | RGDID: | 1309445 | Length: | 2290 | Species: | Rattus norvegicus |
Alignment Length: | 529 | Identity: | 118/529 - (22%) |
---|---|---|---|
Similarity: | 193/529 - (36%) | Gaps: | 140/529 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 91 INNSTGAIQPGT---------------LMALMGSSGSGKTTLMSTLAFRQPAGTVVQGDILINGR 140
Fly 141 RIGPFMHRIS---GYVYQDDLFLGSLTVLEHLNFMAHLRLDRRVSKEERRLIIKELLERTGLLSA 202
Fly 203 AQTRIGSGDDKKVLSGGERKRLAFAVELLNNPVILFCDEPTTGLDSYSAQQLVATLYELAQKGTT 267
Fly 268 ILCTIHQPSSQLFDNFNNVMLLADGRVAFTGSPQHALSFFANHGYY------------------- 313
Fly 314 ------------CP---EAYNPADFLIGVL--ATDPGYEQASQRSAQHLCDQFAV----SSAAKQ 357
Fly 358 R---DMLVNLEIHMAQSGNFPF---DTEVE--------------SFRGVAWYKRFHVVWLRASLT 402
Fly 403 LLRDPTIQWLRFIQKIAMAFIIGACFAG---------TTEPSQLGVQAVQGALFIMISENTYHPM 458
Fly 459 YSVLNLFPQGFPLFMRETRSGLYSTGQYYAANI--------LALLPGMIIEP---LIFVIICYWL 512
Fly 513 TGLRSTFYA 521 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
st | NP_524108.1 | ABCG_EPDR | 66..298 | CDD:213180 | 60/224 (27%) |
3a01204 | 67..665 | CDD:273361 | 118/529 (22%) | ||
ABC2_membrane | 395..600 | CDD:279410 | 29/147 (20%) | ||
Abca4 | NP_001101191.1 | rim_protein | 1..2249 | CDD:130324 | 118/529 (22%) |
ABC_subfamily_A | 907..1126 | CDD:213230 | 62/230 (27%) | ||
ABC_subfamily_A | 1915..2135 | CDD:213230 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |