Sequence 1: | NP_524108.1 | Gene: | st / 39836 | FlyBaseID: | FBgn0003515 | Length: | 666 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038957107.1 | Gene: | Abca16 / 293444 | RGDID: | 1563534 | Length: | 1680 | Species: | Rattus norvegicus |
Alignment Length: | 849 | Identity: | 161/849 - (18%) |
---|---|---|---|
Similarity: | 288/849 - (33%) | Gaps: | 289/849 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 40 PKLSKRNSSERSLP-LRSYSKWSPTEQGATLVWRDLCVYTNVGGSGQRMKRIINNSTGAIQPGTL 103
Fly 104 MALMGSSGSGKTTLMSTLAFRQPAGTVVQGDILINGRRIGPFMHRIS---GYVYQDDLFLGSLTV 165
Fly 166 LEHLNFMAHLR-LDRRVSKEE--RRLIIKELLERTGLLSAAQTRIGSGDDKKVLSGGERKRLAFA 227
Fly 228 VELLNNPVILFCDEPTTGLDSYSAQQLVATLYELAQKGTTILCTIHQPSSQLFDNFNNVMLLADG 292
Fly 293 RVAFTGSPQHALSFFANH----GYYC---PEAYNPADFLI---------GVLATDPGYE------ 335
Fly 336 -------------------------------------------QASQRSAQHLCDQFAVSSAAKQ 357
Fly 358 RDMLVNLEIHMAQSGN---FPFDTEVESFR---GVAWYK-RFHVVWLRASLTLLRDPTIQWLRFI 415
Fly 416 QKIAMA--------------------------FIIGACFAGTTE--------------PSQLGVQ 440
Fly 441 AVQG------------------ALFIMISEN-----------TYHPMYSVLNLFPQGFPLFM--- 473
Fly 474 -RETRSGLYSTGQ---YYAANILALLPGMIIEPLIFVI--------------------------- 507
Fly 508 IC---YWLTGLRS--TFYAFGVTAMCVVLVMNVATACGCF-------FSTAFN---SVPLAMAY- 556
Fly 557 --LVPLDYIFMITSGIFIQVNSLPVAF-------WWTQFLSWMLYANEAMTAAQWSGVQNITCFQ 612
Fly 613 ESADLPCFHTGQDV---LDKYS-------------------FNESNVYRNLLAMVGLYFGFHLLG 655
Fly 656 YYCL 659 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
st | NP_524108.1 | ABCG_EPDR | 66..298 | CDD:213180 | 61/237 (26%) |
3a01204 | 67..665 | CDD:273361 | 155/821 (19%) | ||
ABC2_membrane | 395..600 | CDD:279410 | 53/332 (16%) | ||
Abca16 | XP_038957107.1 | rim_protein | <163..1664 | CDD:130324 | 161/849 (19%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |