DRSC/TRiP Functional Genomics Resources

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Protein Alignment st and Abcg2

DIOPT Version :9

Sequence 1:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_001342406.1 Gene:Abcg2 / 26357 MGIID:1347061 Length:657 Species:Mus musculus


Alignment Length:600 Identity:174/600 - (28%)
Similarity:299/600 - (49%) Gaps:43/600 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 KRIINNSTGAIQPGTLMALMGSSGSGKTTLMSTLAFRQ-PAGTVVQGDILINGRRIGPFMHRISG 151
            |.|:::..|.::|| |.|::|.:|.||::|:..||.|: |.|  :.||:||||..........||
Mouse    60 KEILSDINGIMKPG-LNAILGPTGGGKSSLLDVLAARKDPKG--LSGDVLINGAPQPAHFKCCSG 121

  Fly   152 YVYQDDLFLGSLTVLEHLNFMAHLRLDRRVSKEERRLIIKELLERTGLLSAAQTRIGSGDDKKVL 216
            ||.|||:.:|:|||.|:|.|.|.|||...:...|:...|..:::..||...|.:::|: ...:.:
Mouse   122 YVVQDDVVMGTLTVRENLQFSAALRLPTTMKNHEKNERINTIIKELGLEKVADSKVGT-QFIRGI 185

  Fly   217 SGGERKRLAFAVELLNNPVILFCDEPTTGLDSYSAQQLVATLYELAQKGTTILCTIHQPSSQLFD 281
            |||||||.:..:||:.:|.|||.|||||||||.:|..::..|..::::|.||:.:||||...:|.
Mouse   186 SGGERKRTSIGMELITDPSILFLDEPTTGLDSSTANAVLLLLKRMSKQGRTIIFSIHQPRYSIFK 250

  Fly   282 NFNNVMLLADGRVAFTGSPQHALSFFANHGYYCPEAYNPADFLIGVLATDPGYEQASQRSAQHLC 346
            .|:::.|||.|::.|.|..|.||.:||:.||:|....|||||.:.|:..|......::....:..
Mouse   251 LFDSLTLLASGKLVFHGPAQKALEYFASAGYHCEPYNNPADFFLDVINGDSSAVMLNREEQDNEA 315

  Fly   347 DQFAVSSAAKQRDMLVNLE---IHMAQSGNFPFDTE----VESFRGVAWYKR--------FHVVW 396
            ::....|.. ::.::.||.   |:.|..|....:.:    .:..:|.:.:|.        ..:.|
Mouse   316 NKTEEPSKG-EKPVIENLSEFYINSAIYGETKAELDQLPGAQEKKGTSAFKEPVYVTSFCHQLRW 379

  Fly   397 L--RASLTLLRDPTIQWLRFIQKIAMAFIIGACFAGTTEPSQLGVQAVQGALFIMISENTYHPMY 459
            :  |:...||.:|.....:.|..:.:..||||.:. ..:....|:|...|.||.:.:...:..: 
Mouse   380 IARRSFKNLLGNPQASVAQLIVTVILGLIIGAIYF-DLKYDAAGMQNRAGVLFFLTTNQCFSSV- 442

  Fly   460 SVLNLFPQGFPLFMRETRSGLYSTGQYYAANILA-LLPGMIIEPLIFVIICYWLTGLRSTFYAFG 523
            |.:.||.....||:.|..||.|....|:...::: |||...:..:||..|.|::.||:.|..||.
Mouse   443 SAVELFVVEKKLFIHEYISGYYRVSSYFFGKVMSDLLPMRFLPSVIFTCILYFMLGLKKTVDAFF 507

  Fly   524 VTAMCVVLVMNVATACGCFFSTAFNSVPLAMAYLVPLDYIF-MITSGIFIQVNSLPVAFWWTQFL 587
            :....:::|...|::.....:|..:.|.:| ..|:.:.::| |:.||:.:.:.::.....|.|:.
Mouse   508 IMMFTLIMVAYTASSMALAIATGQSVVSVA-TLLMTIAFVFMMLFSGLLVNLRTIGPWLSWLQYF 571

  Fly   588 SWMLYANEAMTAAQWSG---------VQNITCFQESADLPCFHTGQDVLDKYSFNES--NVYRNL 641
            |...|...|:...::.|         ..|.||....|    ..||.:.|.......|  .:::|.
Mouse   572 SIPRYGFTALQYNEFLGQEFCPGFNVTDNSTCVNSYA----ICTGNEYLINQGIELSPWGLWKNH 632

  Fly   642 LAMVGLYFGFHLLGY 656
            :|:..:...|..:.|
Mouse   633 VALACMIIIFLTIAY 647

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stNP_524108.1 ABCG_EPDR 66..298 CDD:213180 85/210 (40%)
3a01204 67..665 CDD:273361 173/599 (29%)
ABC2_membrane 395..600 CDD:279410 52/208 (25%)
Abcg2NP_001342406.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..24
3a01204 46..651 CDD:273361 173/599 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167831366
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.750

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