DRSC/TRiP Functional Genomics Resources

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Protein Alignment st and Abcg4

DIOPT Version :9

Sequence 1:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_620405.3 Gene:Abcg4 / 192663 MGIID:1890594 Length:646 Species:Mus musculus


Alignment Length:677 Identity:195/677 - (28%)
Similarity:330/677 - (48%) Gaps:98/677 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 ERVEQHELQVMPVGSTIEVPSLDSTPKLSKRNSSERSLPLRSYSKWSPTEQGATLVWRDLCVYTN 79
            ::||.|            :........|.||::.:......|||    ..:|.  .||.      
Mouse    38 KKVENH------------ITEAQRFSHLPKRSAVDIEFVELSYS----VREGP--CWRK------ 78

  Fly    80 VGGSGQRMKRIINNSTGAIQPGTLMALMGSSGSGKTTLMSTLAFRQPAGTVVQGDILING--RRI 142
                 :..|.::...:|......|:.:||.||:||:|.|:.||..:.:|  ::|.||:||  |.:
Mouse    79 -----RGYKTLLKCLSGKFCRRELIGIMGPSGAGKSTFMNILAGYRESG--MKGQILVNGRPREL 136

  Fly   143 GPFMHRISGYVYQDDLFLGSLTVLEHLNFMAHLRLDRRVSKEERRLIIKELLERTGLLSAAQTRI 207
            ..| .::|.|:.|||:.|..|||||.:...|:|:|..:  :|.::.::.|:|...||:|.:.||.
Mouse   137 RTF-RKMSCYIMQDDMLLPHLTVLEAMMVSANLKLSEK--QEVKKELVTEILTALGLMSCSHTRT 198

  Fly   208 GSGDDKKVLSGGERKRLAFAVELLNNPVILFCDEPTTGLDSYSAQQLVATLYELAQKGTTILCTI 272
            .      :||||:|||||.|:||:|||.::|.||||:||||.|..|:|:.:..||..|.|::|||
Mouse   199 A------LLSGGQRKRLAIALELVNNPPVMFFDEPTSGLDSASCFQVVSLMKSLAHGGRTVICTI 257

  Fly   273 HQPSSQLFDNFNNVMLLADGRVAFTGSPQHALSFFANHGYYCPEAYNPADFLIGVLATDPG-YEQ 336
            ||||::||:.|:.:.:|:.|:..|.|...:.:.:....|.:||..:|||||:|.|.:.:.| ...
Mouse   258 HQPSAKLFEMFDKLYILSQGQCIFKGVVTNLIPYLKGLGLHCPTYHNPADFIIEVASGEYGDLNP 322

  Fly   337 ASQRSAQH-LCDQFAVSSAAKQRDMLVNL-----EIHMAQSGNFPFDTEVESFRGVAWYKRFHVV 395
            ...|:.|: ||......|:..:.::..:.     |:...:|..|...|          ..:|.::
Mouse   323 MLFRAVQNGLCTMAEKKSSPGKNELPAHCPTCPPELDPIESHTFATST----------LTQFCIL 377

  Fly   396 WLRASLTLLRDPTIQWLRFIQKIAMAFIIGACFAGTTEPSQLGVQAVQGALFIMISENTYHPMYS 460
            :.|..|::|||..:..|||:..:.:..:||..:.      .:|..|.:      :..||....:|
Mouse   378 FRRTFLSILRDTVLTHLRFMSHVLIGVLIGLLYL------HIGDDASK------VFNNTGFLFFS 430

  Fly   461 VLNL-----------FPQGFPLFMRETRSGLYSTGQYYAANILALLPGMIIEPLIFVIICYWLTG 514
            :|.|           ||....:||||..:..|:...||.|..:|.:|..::.|:::..|.||:||
Mouse   431 MLFLMFAALMPTVLTFPLEMAVFMREHLNYWYTLKAYYLAKTMADVPFQVVCPVVYCSIVYWMTG 495

  Fly   515 L---RSTFYAFGVTAMCVVLVMNVATACGCFFSTAFNSVPLAMAYLVPLDYI-FMITSGIFIQVN 575
            .   .|.|..|...|:...|   ||.:.|.....|..|:.:| .::.|:..| .::.||.|:...
Mouse   496 QPAETSRFLLFSALAIATAL---VAQSLGLLIGAASTSLQVA-TFVGPVTAIPVLLFSGFFVSFK 556

  Fly   576 SLPVAFWWTQFLSWMLYANEAMTAAQWSGVQ--NITCFQESADLPCFHTGQDVLDKYSFNESNVY 638
            ::|....|:.:||::.|..|.:....: |::  ::||..|...   |...|.:|.:....|:.:|
Mouse   557 TIPTYLQWSSYLSYVRYGFEGLILTIY-GMERGHLTCLDEQCP---FRDPQIILRELDVEEAKLY 617

  Fly   639 RNLLAMVGLYF-GFHLLGYYCLWRRAR 664
            .:.| ::|::| ...||.|..|..|.:
Mouse   618 MDFL-VLGIFFLALRLLAYLVLRYRVK 643

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stNP_524108.1 ABCG_EPDR 66..298 CDD:213180 90/233 (39%)
3a01204 67..665 CDD:273361 185/625 (30%)
ABC2_membrane 395..600 CDD:279410 57/219 (26%)
Abcg4NP_620405.3 3a01204 44..646 CDD:273361 192/659 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167831362
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.740

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