DRSC/TRiP Functional Genomics Resources

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Protein Alignment st and wht-7

DIOPT Version :9

Sequence 1:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_001367851.1 Gene:wht-7 / 175864 WormBaseID:WBGene00021535 Length:666 Species:Caenorhabditis elegans


Alignment Length:690 Identity:223/690 - (32%)
Similarity:346/690 - (50%) Gaps:86/690 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 GSTIEVPSLDSTPKLSKRNSS--ERSLPLRSYSKWSPTEQGATLVWRDLCV-------YTNVG-- 81
            ||...:..:|||..:.|.:.|  |...|            ...|.|.|:.|       .:|.|  
 Worm     9 GSIESMSVVDSTSDIDKADKSFMEELRP------------KMLLTWHDISVSDSSEDYSSNSGLF 61

  Fly    82 --------GSGQRM---KRIINNSTGAIQPGTLMALMGSSGSGKTTLMSTLAFRQPAGTVVQGDI 135
                    |..::|   |||:::..|..:||.:.|::|.||:|||||::.|..|..:.....|.:
 Worm    62 GKCCPIKVGDVEKMSVEKRILDSVFGVARPGEVTAIIGPSGAGKTTLLNVLTKRNLSNLKATGSV 126

  Fly   136 LING-RRIGPFMHRISGYVYQDDLFLGSLTVLEHLNFMAHLRL--DRRVSKEERRLIIKELLERT 197
            .:|| |....:|.::..||.|||.|:|||||.|||.|||.|::  :..::::|||  :|.::...
 Worm   127 KVNGIRAERSYMRQVCAYVQQDDCFIGSLTVEEHLKFMAKLKMGSEYDLNEQERR--VKSVMRSL 189

  Fly   198 GLLSAAQTRIGSGDDKKVLSGGERKRLAFAVELLNNPVILFCDEPTTGLDSYSAQQLVATLYELA 262
            ||...|.:.||: ..:|.:||||:||||||.|:|.:|.||.|||||:||||:.|.|:|..|.:||
 Worm   190 GLEKIADSIIGT-RTRKGISGGEKKRLAFASEILTSPPILICDEPTSGLDSFLAYQVVCVLKKLA 253

  Fly   263 Q-KGTTILCTIHQPSSQLFDNFNNVMLLADGRVAFTGSPQHALSFFANHGYYCPEAYNPADFLIG 326
            : :..|||.||||||||:|..|:::.::.:|.|||.||...|...::......|..:||:|..:.
 Worm   254 ETRNMTILLTIHQPSSQVFQLFDSIYMMVNGDVAFCGSQSGAEKMWSEMKLPIPMNFNPSDHYLA 318

  Fly   327 VLA-TDPGYEQASQRSAQHLCDQFAVSSAAKQRDMLVNLEIHMAQSGNFPFDTEV--------ES 382
            .:: .|...|...:.....:|..|..|...|        .:....||.     ||        |.
 Worm   319 TMSIRDQAEETLKKNQIGKICTTFKYSELGK--------SVFKESSGR-----EVDERDRAFSED 370

  Fly   383 FR------------GVAWYKRFHVVWLRASLTLLRDPTIQWLRFIQKIAMAFIIGACFAGTTEPS 435
            :|            |.:::::...:..|||.|:||:||:..::..|.|.:|.:.|..:...:...
 Worm   371 WRRRYATTFGRPRFGASFFQQIRALTWRASKTVLREPTLLKVQTFQSIIIAILTGLVYTNNSPVD 435

  Fly   436 QLGVQAVQGALFIMISENTYHPMYSVLNLFPQGFPLFMRETRSGLYSTGQYYAANILALLPGMII 500
            |..:..:.|:|:.|||...:...:||::.|......|.|||.|.||....|:.:..||.||..|:
 Worm   436 QQKIMNINGSLYQMISNMAFMFQFSVVHHFCLEMNTFYRETSSRLYRVSAYFISKNLAELPSYIV 500

  Fly   501 EPLIFVIICYWLTGLRSTFYAFGVTAMCVVLVMNVATACGCFFSTAFNSVPLAMA----YLVPLD 561
            ..:||..|.||::||.....:|.:..:..:||.|:|.:.|..||..|.:|.||:|    ::||: 
 Worm   501 SAVIFTSILYWMSGLVPIIDSFLIYMLVGILVQNIAISIGYMFSCIFGTVNLAVAVMPIFVVPM- 564

  Fly   562 YIFMITSGIFIQVNSLPVAFWWTQFLSWMLYANEAMTAAQWSGVQNIT-CFQESADLPCFHTGQD 625
               |...|.||..::|...|...::||:..|..||:..|||:.|:.|. |....|.  |...|.|
 Worm   565 ---MAFGGFFINQDTLQWYFVPMKYLSYFGYGYEAVAIAQWTHVEEIPGCSSSLAH--CSRNGTD 624

  Fly   626 VLDKYSFNESNVYRNLLAMVGLYFGFHLLGYYCLWRRARK 665
            ||:..||..||.:.::..|..:.|.|..|.:..|:.|.::
 Worm   625 VLNSMSFKPSNFWVDISVMAFMIFVFRFLAFMALYVRVKR 664

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stNP_524108.1 ABCG_EPDR 66..298 CDD:213180 105/255 (41%)
3a01204 67..665 CDD:273361 214/647 (33%)
ABC2_membrane 395..600 CDD:279410 67/208 (32%)
wht-7NP_001367851.1 3a01204 40..664 CDD:273361 214/645 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D209530at33208
OrthoFinder 1 1.000 - - FOG0000053
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X52
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.020

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