DRSC/TRiP Functional Genomics Resources

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Protein Alignment st and AgaP_AGAP003680

DIOPT Version :9

Sequence 1:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster
Sequence 2:XP_313462.4 Gene:AgaP_AGAP003680 / 1274354 VectorBaseID:AGAP003680 Length:777 Species:Anopheles gambiae


Alignment Length:469 Identity:104/469 - (22%)
Similarity:187/469 - (39%) Gaps:116/469 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 WSPTEQGATLVWRDLCVYTNVGGSGQRMKRIINNSTGAIQPGTLMALMGSSGSGKTTLMSTLAFR 124
            || .:|.|..|......|    |:.::..::::|....:..||:..|:|:||.|||||:|.:..|
Mosquito    37 WS-RQQNAVSVRHAFKSY----GTKKKPNQVLSNLNMTVAKGTIYGLLGASGCGKTTLLSCIVGR 96

  Fly   125 QPAGTVVQGDILINGRRIGPFMHRIS----GYVYQDDLFLGSLTVLEHLNFMAHLRLDRRVSKEE 185
            :...:   |:|.:.|.:.|.....:.    ||:.|:....|..::.|.:.:...:          
Mosquito    97 KRLNS---GEIWVLGGKPGTKGSGVPGARVGYMPQEIALYGEFSIRETMMYFGWI---------- 148

  Fly   186 RRLIIKELLERTGLL-----SAAQTRIGSGDDKKVLSGGERKRLAFAVELLNNPVILFCDEPTTG 245
            ..:...|::||...|     ..:::|:     .|.||||:::|::|||.|:::|.:|..||||.|
Mosquito   149 FGMHTSEIVERLQFLLNFLDLPSESRL-----VKNLSGGQQRRVSFAVALMHDPELLILDEPTVG 208

  Fly   246 LDSYSAQQLVATLYELAQKG-TTILCTIH--QPSSQLFDNFNNVMLLADGRVAFTGSPQHALSFF 307
            :|....|.:...|..:.:.| .|::.|.|  :.:.|.    :.:.|:..||:....||...||. 
Mosquito   209 VDPLLRQSIWNHLVHITKAGQKTVIITTHYIEEARQA----HTIGLMRSGRLLAEESPSCLLSM- 268

  Fly   308 ANHGYYCPEAYNPADFLIGVLATDPGYEQASQRSAQ-HLCDQFAVSSAA-----------KQRDM 360
                |.|....:.  ||  .|:...|  ||:...|: ::.:..::|:.|           .|...
Mosquito   269 ----YRCSSLEDV--FL--KLSRKQG--QANVAPAELNISNNISLSALAFGNKKDNPVYVSQESG 323

  Fly   361 LVNLEIHMAQ-------------------------------------SG--NFPFDTEVESFRGV 386
            :|.|..|.::                                     ||  ||....::.:.   
Mosquito   324 VVGLNFHQSKEVLISDSNGSTIAINGLNGSAPGAISQAVECDNCTECSGCSNFTSKGKIRAL--- 385

  Fly   387 AWYKRFHVVWLRASLTLLRDPTIQWLRFIQKIAMAFIIGACFAGTTEPSQLGVQAVQGALFIMI- 450
             ..|.|..:|....:.|          ||..:.:..:|..|.|...:|:.|.:..|.|.:...| 
Mosquito   386 -LVKNFLRMWRNVGVML----------FIFALPVMQVILFCLAIGRDPTNLKMAIVNGEMNSTIG 439

  Fly   451 SENTYHPMYSVLNL 464
            ::..:.|..|..||
Mosquito   440 ADCAFDPGCSFTNL 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stNP_524108.1 ABCG_EPDR 66..298 CDD:213180 60/243 (25%)
3a01204 67..665 CDD:273361 101/462 (22%)
ABC2_membrane 395..600 CDD:279410 16/71 (23%)
AgaP_AGAP003680XP_313462.4 CcmA 42..310 CDD:224054 75/304 (25%)
ABC_DR_subfamily_A 44..256 CDD:213197 58/237 (24%)
ABC2_membrane_3 398..766 CDD:289468 15/66 (23%)
ABC2_membrane 570..738 CDD:279410
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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