DRSC/TRiP Functional Genomics Resources

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Protein Alignment st and Abcg5

DIOPT Version :9

Sequence 1:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster
Sequence 2:NP_446206.2 Gene:Abcg5 / 114628 RGDID:620298 Length:652 Species:Rattus norvegicus


Alignment Length:606 Identity:174/606 - (28%)
Similarity:283/606 - (46%) Gaps:79/606 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 KRIINNSTGAIQPGTLMALMGSSGSGKTTLMSTLAFRQPAGTVVQGDILING--RRIGPFMHRIS 150
            ::|:.:.:..|:.|..|.::||||||||||:..::.|......::|::.:||  .|...|...:|
  Rat    67 RKILKDVSLYIESGQTMCILGSSGSGKTTLLDAISGRLRRTGTLEGEVFVNGCELRRDQFQDCVS 131

  Fly   151 GYVYQDDLFLGSLTVLEHLNFMAHLRLDRRVSKEERRLIIKELLERTGLLSAAQTRIGS---GDD 212
             |:.|.|:||.||||.|.|.:.|.|.| |..|.:.....::.:|....|...|...||:   |. 
  Rat   132 -YLLQSDVFLSSLTVRETLRYTAMLAL-RSSSADFYDKKVEAVLTELSLSHVADQMIGNYNFGG- 193

  Fly   213 KKVLSGGERKRLAFAVELLNNPVILFCDEPTTGLDSYSAQQLVATLYELAQKGTTILCTIHQPSS 277
               :|.|||:|::.|.:||.:|.::..||||||||..:|..:|..|.|||::...::.|||||.|
  Rat   194 ---ISSGERRRVSIAAQLLQDPKVMMLDEPTTGLDCMTANHIVLLLVELARRNRIVIVTIHQPRS 255

  Fly   278 QLFDNFNNVMLLADGRVAFTGSPQHALSFFANHGYYCPEAYNPADFLIGVLATDPGYEQASQRSA 342
            :||.:|:.:.:|..|.:.|.|:|:..|.||.|.||.|||..||.||.:.:.:.|   .|:.:|..
  Rat   256 ELFHHFDKIAILTYGELVFCGTPEEMLGFFNNCGYPCPEHSNPFDFYMDLTSVD---TQSREREI 317

  Fly   343 QHLCDQFAVSSAAKQRD----MLVNLE--IHMAQSGNFPFDTEVESFRGVAWYKRFHVVWLRASL 401
            :.......:.||.:|.|    :|.|:|  .|:......||.|:    .....:.:..|:..|.:.
  Rat   318 ETYKRVQMLESAFRQSDICHKILENIERTRHLKTLPMVPFKTK----NPPGMFCKLGVLLRRVTR 378

  Fly   402 TLLRDPTIQWLRFIQKIAMA-FIIGACFAGTTEPSQLGVQAVQGALFIMISENTYHPMYSVLNLF 465
            .|:|:..:..:|.:|.:.|. |:|...........:..||...|.|:.::....|..|.:.:|||
  Rat   379 NLMRNKQVVIMRLVQNLIMGLFLIFYLLRVQNNMLKGAVQDRVGLLYQLVGATPYTGMLNAVNLF 443

  Fly   466 PQGFPLFMRETRSGLYSTGQYYAANILALLPGMIIEPLIFVIICYWLTGLRSTFYAFG------- 523
            |....:..:|::.|||...|...|.:|..||..|:..:||..:|||..||......||       
  Rat   444 PMLRAVSDQESQDGLYQKWQMLLAYVLHALPFSIVATVIFSSVCYWTLGLYPEVARFGYFSAALL 508

  Fly   524 --------VTAMCVVLVMNVATACGCFFSTAFNSVPLAMAYLVPLDYIFMITSGIFIQVNSLPVA 580
                    :|.:.:.:|.|         ....||: :|:..:..|    :|.||....:..:|:.
  Rat   509 APHLIGEFLTLVLLGMVQN---------PNIVNSI-VALLSISGL----LIGSGFIRNIEEMPIP 559

  Fly   581 FWWTQFLSWMLYANEAMTAAQWSGVQNITCFQESADLP----CFHT-GQDVLDK----------- 629
            .....:.::..|..|.:...::.|: |.||...:..:|    |..| |...::|           
  Rat   560 LKILGYFTFQKYCCEILVVNEFYGL-NFTCGGSNTSVPNNPMCSMTQGIQFIEKTCPGATSRFTT 623

  Fly   630 -----YSFNESNVYRNLLAMV 645
                 |||..:.|   :|.||
  Rat   624 NFLILYSFIPTLV---ILGMV 641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stNP_524108.1 ABCG_EPDR 66..298 CDD:213180 78/214 (36%)
3a01204 67..665 CDD:273361 174/606 (29%)
ABC2_membrane 395..600 CDD:279410 50/220 (23%)
Abcg5NP_446206.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..30
ABCG_White 50..276 CDD:213201 78/214 (36%)
3a01204 61..646 CDD:273361 174/606 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 92 1.000 Domainoid score I7408
eggNOG 1 0.900 - - E2759_KOG0061
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48041
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.920

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