DRSC/TRiP Functional Genomics Resources

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Protein Alignment st and abcg8

DIOPT Version :9

Sequence 1:NP_524108.1 Gene:st / 39836 FlyBaseID:FBgn0003515 Length:666 Species:Drosophila melanogaster
Sequence 2:XP_031758486.1 Gene:abcg8 / 100498405 XenbaseID:XB-GENE-981625 Length:682 Species:Xenopus tropicalis


Alignment Length:704 Identity:185/704 - (26%)
Similarity:318/704 - (45%) Gaps:108/704 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 EQHELQVMPVGSTIEVPSLDSTPKLSKRNSSERSLPLRSYSKWSPTEQGA--TLVWRDLCVYTNV 80
            :|.:.|::|       |||        |.:.:..||....|.:. |..||  .|..:||....|:
 Frog    14 KQDQFQMLP-------PSL--------RRNDDLYLPEEDNSLYF-TYSGAPNVLEVKDLTYQVNL 62

  Fly    81 G---------------------GSGQRMKRIINNSTGAIQPGTLMALMGSSGSGKTTLMSTLAFR 124
            .                     |....||    |....:..|.::|::|::|.|||:|:..:..:
 Frog    63 NAQIPWYEKLAEFKMPWEWNKDGQISAMK----NINVKVTSGQMLAVIGNTGCGKTSLLDIITCK 123

  Fly   125 QPAGTVVQGDILINGRRIGPFMHRIS---GYVYQDDLFLGSLTVLEHLNFMAHLRLDRRVSKEER 186
            ...|.:..|.|||||:  ....||:.   .:|.|||..|..|||.|.|.|:|.|||.:..|:|:|
 Frog   124 DEGGKIKSGQILINGK--VSTKHRVKKCVAHVRQDDQLLPHLTVRETLTFIAKLRLPKSYSEEQR 186

  Fly   187 RLIIKELLERTGLLSAAQTRIGSGDDKKVLSGGERKRLAFAVELLNNPVILFCDEPTTGLDSYSA 251
            |..:::::....|...|.|::|:...:.| |||||:|::..|:||.||.||..||||:||||::|
 Frog   187 RRQVEDVIAELRLRQCANTKVGNTYTRGV-SGGERRRVSIGVQLLWNPGILILDEPTSGLDSFTA 250

  Fly   252 QQLVATLYELAQKGTTILCTIHQPSSQLFDNFNNVMLLADGRVAFTGSPQHALSFFANHGYYCPE 316
            ..||.||..||:....:|.:||||.|.:|..|:.|:||:.|...::|:.:..:.:|::.||.||.
 Frog   251 HNLVITLSRLARGNRLVLLSIHQPRSDIFQLFDLVLLLSSGATIYSGTAKDMVEYFSSIGYPCPR 315

  Fly   317 AYNPADFLIGVLATDPGYEQASQRSAQHL----------------CDQFAVSSAAKQRDML---- 361
            ..|||||.:.:.:.|   ::..:|..:.|                .|.|......:....:    
 Frog   316 YSNPADFYVDLTSID---QRNKERETESLERTRSLAEIFWEKVKDSDDFLWKPPGEANKNITPTN 377

  Fly   362 --VNLEIHMAQSGNFPFDTEVESF-RGVAWYKRFHVVWLRASLTLLRDPTIQWLRFIQKIAMAFI 423
              :||.:...:......:::::.. ||:   .:|.|:..|.....|||.:...:...:.:.||.:
 Frog   378 TSINLPVSAHEKAIKIKNSDMDQLPRGL---HQFSVLLRRHVSNDLRDLSTLLIHGFEALVMALL 439

  Fly   424 IGACFAGTTEPSQLGVQAVQGALFIMISENTYHPMYSVLNLFPQGFPLFMRETRSGLYSTGQYYA 488
            ||..:.|... :||.:|.....||:..|...:..:..|:........:...:...||||...|:.
 Frog   440 IGFLYYGQGN-NQLSIQDSIALLFMKGSLTPFAVVLDVVAKCHSERAMLYHDLEDGLYSVTPYFF 503

  Fly   489 ANILALLPGMIIEPLIFVII----CYWLTGLRSTFYAFGVTAMCVVLVMNVATACGCFFSTAFNS 549
            |.::..||    |...|||.    .|||..|......|.:....::|::..:.|...:.|....:
 Frog   504 AKVIGELP----EHFAFVIFYGVPIYWLANLNPHPECFLLNFALLLLIVYCSRAMALWMSALLPT 564

  Fly   550 VPLAMAYLVPLDYIF---MITSGIFIQVNSLPVAFWWTQFLSWMLYANEAMTAAQWSG------V 605
            :.:: ::|  .:.||   .:|.|..|::.:|....:|..::|::.:..|.:...|::.      |
 Frog   565 LQMS-SFL--SNAIFTSSYLTGGFIIRLENLWTVPYWISYVSFLRWGFEGLMQVQFTDLSYKVPV 626

  Fly   606 QNITCFQESADLPCFHTGQDVLDKYSFNESNVYRNLLAMVGLYFGFHLLGYYCL 659
            .|||     ..:|    |..::.....:...:|.:.|.::|:..||.:|.|..|
 Frog   627 GNIT-----ITIP----GTAIISNMEMDSHPLYASYLVLIGIIAGFLVLYYLSL 671

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
stNP_524108.1 ABCG_EPDR 66..298 CDD:213180 91/257 (35%)
3a01204 67..665 CDD:273361 173/655 (26%)
ABC2_membrane 395..600 CDD:279410 46/211 (22%)
abcg8XP_031758486.1 3a01204 61..672 CDD:273361 169/641 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1022017at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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