DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33158 and RIA1

DIOPT Version :9

Sequence 1:NP_788515.1 Gene:CG33158 / 39834 FlyBaseID:FBgn0053158 Length:1033 Species:Drosophila melanogaster
Sequence 2:NP_014236.1 Gene:RIA1 / 855558 SGDID:S000005107 Length:1110 Species:Saccharomyces cerevisiae


Alignment Length:1173 Identity:431/1173 - (36%)
Similarity:632/1173 - (53%) Gaps:204/1173 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPVVEGSDLVLLQRRRQQVRNICILAHVDHGKTTLADSLVASNGIISQRMAGKLRYLDNRSDEQE 65
            ||.||......||.....:|||||:||||||||:|:|||:|||||||||:|||:|:||.|.|||.
Yeast     1 MPRVESETYKRLQNDPSCIRNICIVAHVDHGKTSLSDSLLASNGIISQRLAGKIRFLDARPDEQL 65

  Fly    66 RGITMKSSSISLYYQEAEEMAGN-----PDYLINLIDSPGHVDFSSEVSTAVRLCDGAIVVVDVV 125
            |||||:||:||||::...:..|:     .::|:||||||||:|||||||.|.||||||:|:||||
Yeast    66 RGITMESSAISLYFRVLRKQEGSDEPLVSEHLVNLIDSPGHIDFSSEVSAASRLCDGAVVLVDVV 130

  Fly   126 EGVGPQTRACLRQIYEEQLKPVLVLNKLDRLILEKQMDPLDAYFHLCQVLEQVNAVLGSIFAS-- 188
            |||..||...|||.:.|:|||:|||||:||||.|.|:.|.:||.||.:|:||||:|:||.||:  
Yeast   131 EGVCSQTVTVLRQCWTEKLKPILVLNKIDRLITELQLTPQEAYIHLSKVIEQVNSVIGSFFANER 195

  Fly   189 ---DILAKEDITKKDNYESALEEVDDSELYFSPSSGNVIFCSAYDGWAFSVRDFAAMYAKRLEMS 250
               |:..:|.:.|.:|.|..  |.|||.:||:|:..||||.||.|||.|::...|..|.::|...
Yeast   196 QLDDLFWREQLEKNENAEYI--EKDDSGIYFNPTDNNVIFASAIDGWGFNIGQLAKFYEQKLGAK 258

  Fly   251 RKDLENVLWGDFYYNSKKKEAL--PGAQEKAKKPMFVQFVLENIWSLYDIIAIRKDKDKLPGIAE 313
            |::|:.|||||||.:.|.|:.:  .|.:.::.||:|...:|||||.:|..|...:|.:.:..||:
Yeast   259 RENLQKVLWGDFYMDPKTKKIINNKGLKGRSLKPLFTSLILENIWKIYQNIITSRDSEMVEKIAK 323

  Fly   314 KLGLKLATRDLRLTDPKLQIKAVLGQWLPIDKSVLHMVIQHVPPPHKISDERAQRLLYPANVDLS 378
            .|.:||..||||..|.|..::.::|||||:..:||..||:.:|.|.:...:|...:|. :..|.:
Yeast   324 TLNIKLLARDLRSKDDKQLLRTIMGQWLPVSTAVLLTVIEKLPSPLESQTDRLNTILV-SESDTA 387

  Fly   379 SLPPETLELKESFTSCDANSSNVIAFVSKMTPVHITHLPQNRPKRLTDQEVQQRRDEVRRRIEER 443
            ::.|..|   ::..:|| ....|.|:||||..:....||....:..:..|:.:|..:.|   ||.
Yeast   388 AMDPRLL---KAMKTCD-KEGPVSAYVSKMLSIPREELPVESKRIASSDELMERSRKAR---EEA 445

  Fly   444 KQQSEQA---------ELEKISQGVEQL----STQVVGPE-KEESKPEEA--------------- 479
            ...::.|         :|...|:....|    ...|:.|| .|::||:.:               
Yeast   446 LNAAKHAGMVENMAMMDLNDNSKNTSDLYKRAKDTVMTPEVGEQTKPKPSRNNDVFCVVSEPSSA 510

  Fly   480 ----------------------------------------------------------------- 479
                                                                             
Yeast   511 LDLEFEYEGEDDSDSQDNFGLDFVPTDIDPNDPLSSMFEYEEEDPLLESIKQISEDVNDEVDDIF 575

  Fly   480 DQNEFVFIAFARVFSGTLKRGMELFNLSPKHDPRQPTHRKEGEAPYASRVTIGDLYMFMGGELQL 544
            |:.|...:||||::||||:.|.|:..|.||:||:.|....|       ...|..||:|||.||..
Yeast   576 DEKEECLVAFARIYSGTLRVGQEISVLGPKYDPKCPEEHIE-------TAIITHLYLFMGKELVP 633

  Fly   545 LDEVPAGNIVGIGGLESHIVKTATL-SSSLDCTSFSELSVMATPILRVAIEPVQPQDMPKLVKGL 608
            ||..|:||||||.||...::|:.|| ...:...:.:.::...|||:|||:||..|.:|.|||:||
Yeast   634 LDVCPSGNIVGIRGLAGKVLKSGTLIEKGVQGVNLAGVNFHFTPIVRVAVEPANPVEMSKLVRGL 698

  Fly   609 KLLNQADACVQVSVAPTGEHVITTLGEVHVEKCVHDLEQSYAKIKVNVSKPIVSFRETIVPAATV 673
            |||:|||.||...|..||||::.|.||:|:|:|:.||.:.:|.|::..|:|.:.:|||.:.|:  
Yeast   699 KLLDQADPCVHTYVENTGEHILCTAGELHLERCLKDLTERFAGIEITHSEPAIPYRETFLSAS-- 761

  Fly   674 DMVNEAIVKTAEDKDVSKKIAVQQTLNKLGTLKVIAVPLPAEAVELLETHSEFFKEL-------- 730
            ||      ...::..:.:  .|.:.|.....:.....||..:..:.|..|....|.:        
Yeast   762 DM------NPPQNSQLGR--GVHELLLSQYKITFRTFPLSGKVTDFLSQHQNSIKNILKTSTSSM 818

  Fly   731 ---------AAIPRNQLL---------SEKWTALLASIKVKLIAALKDLQLFGLSTLSPEELVNR 777
                     :.:.:..||         .||...||:..||||.                      
Yeast   819 DPVIESTGSSFLDKKSLLVAFEEVINQEEKSRELLSGFKVKLA---------------------- 861

  Fly   778 IWALGPRNCGTNILLNLSDYEQPDFWSSHAKSDTDIRSKTDPRKDFNSSLVNGFQITSVAGPLCE 842
              ..||...|.||||:     |.:...|       :...|....:::.|:.||||:....|||..
Yeast   862 --GFGPSRVGCNILLS-----QDNLLGS-------LFEGTPAAFEYSDSIKNGFQLAVSEGPLAN 912

  Fly   843 EPMQGVCFAVLEWSIQSEGEDLNSRGP--------FSGQVLTAAKEVCRQAFQNQPQRLVTPMYS 899
            ||:||:|..|......|:.|..:...|        .||:::|:.::...:||.:...|::..:||
Yeast   913 EPVQGMCVLVESVHKMSQDEIESIEDPRYQQHIVDLSGRLITSTRDAIHEAFLDWSPRIMWAIYS 977

  Fly   900 CNIVVNAEMLGKMYAVIGRRHGKILSGDLTQGSGNFAVTCLLPVIESFNFAQEMRKQTSGLACPQ 964
            |:|..:.::|||:||||.:|||||:|.::.:|:..|.:...:||:|:|..::::||:|||.|.||
Yeast   978 CDIQTSVDVLGKVYAVILQRHGKIISEEMKEGTPFFQIEAHVPVVEAFGLSEDIRKRTSGAAQPQ 1042

  Fly   965 LMFSHWEVIDIDPFWLPTTEEELMHFGEKADSANRAKVYMDSVRRRKGLFVDEQVVEHAEKQRTL 1029
            |:||.:|.||:||||:|||||||...|:.||..|.|:.:|:::|||||||::|:|||:|||||||
Yeast  1043 LVFSGFECIDLDPFWVPTTEEELEELGDTADRENIARKHMNAIRRRKGLFIEEKVVENAEKQRTL 1107

  Fly  1030 SKN 1032
            .||
Yeast  1108 KKN 1110

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33158NP_788515.1 PTZ00416 15..1016 CDD:240409 412/1141 (36%)
EF2 20..249 CDD:206672 139/238 (58%)
EF2_II 485..572 CDD:293913 39/87 (45%)
EF2_snRNP_III 587..658 CDD:293918 37/70 (53%)
aeEF2_snRNP_like_IV 658..899 CDD:238839 57/274 (21%)
eEF2_snRNP_like_C 896..974 CDD:239763 35/77 (45%)
RIA1NP_014236.1 FusA 1..1091 CDD:357662 415/1152 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344037
Domainoid 1 1.000 300 1.000 Domainoid score I220
eggNOG 1 0.900 - - E1_COG0480
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11599
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2283
OMA 1 1.010 - - QHG53952
OrthoFinder 1 1.000 - - FOG0004608
OrthoInspector 1 1.000 - - oto99752
orthoMCL 1 0.900 - - OOG6_102502
Panther 1 1.100 - - LDO PTHR42908
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2256
SonicParanoid 1 1.000 - - X3227
TreeFam 1 0.960 - -
1514.690

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