DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33158 and gfm1

DIOPT Version :9

Sequence 1:NP_788515.1 Gene:CG33158 / 39834 FlyBaseID:FBgn0053158 Length:1033 Species:Drosophila melanogaster
Sequence 2:NP_001073463.1 Gene:gfm1 / 561840 ZFINID:ZDB-GENE-061013-79 Length:745 Species:Danio rerio


Alignment Length:979 Identity:197/979 - (20%)
Similarity:346/979 - (35%) Gaps:326/979 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 QQVRNICILAHVDHGKTTLADSLVASNGIISQ--RMAGK---LRYLDNRSDEQERGITMKSSSIS 76
            :::|||.|.||:|.|||||.:.::...|.|::  .:.||   ...:|:...|::||||::|::..
Zfish    39 ERIRNIGISAHIDSGKTTLTERVLYYTGRIAEMHEVRGKDGVGAIMDSMELERQRGITIQSAATY 103

  Fly    77 LYYQEAEEMAGNPDYLINLIDSPGHVDFSSEVSTAVRLCDGAIVVVDVVEGVGPQTRACLRQIYE 141
            ..::         ::.||:||:||||||:.||..::|:.|||::|:..|.||..||....||:..
Zfish   104 TMWK---------NHNINIIDTPGHVDFTIEVERSLRVLDGAVLVLCAVGGVQCQTVTVNRQMKR 159

  Fly   142 EQLKPVLVLNKLDRLILEKQMDPLDAYFHLCQVLEQVNAVLGSIFASDILAKEDITKKDNYESAL 206
            ..:..:..:||||||    ..:|..|...|...|.| ||...:|         .|..:.|....:
Zfish   160 YSVPFLTFINKLDRL----GANPNRALQQLRTKLNQ-NAAFVNI---------PIGLEGNLRGII 210

  Fly   207 EEVDDSELYFSPSSGNVIFCSAYDGWAFSVRDFAAMYAKRLEMSRKDLENVLWGDFYYNSKKKEA 271
            :.:::..:.|             ||                                        
Zfish   211 DLIEERSIVF-------------DG---------------------------------------- 222

  Fly   272 LPGAQEKAKKPMFVQFVLENIWSLYDIIAIRKDKDKLPGIAEKLGLKLATRDLRLTDPKLQIKAV 336
                                                                             
Zfish   223 ----------------------------------------------------------------- 222

  Fly   337 LGQWLPIDKSVLHMVIQHVPPP--HKISDERAQRLLYPANVD-------LSSLPPETLELKESFT 392
                 |..:||.:   :.:||.  .:.:|.|.:.:...||.|       |....|..|:||.:..
Zfish   223 -----PFGESVRY---EDIPPEMRSEAADRRQELVECVANADETLGEMFLEERVPTVLDLKAAVR 279

  Fly   393 SCDANSSNVIAFVSKMTPVHITHLPQNRPKRLTDQEVQQRRDEVRRRIEERKQQSEQAELEKISQ 457
            ......|        .:||.:       ...|.::.||...|.|...:....:....|.|.:  :
Zfish   280 RATVKRS--------FSPVLV-------GSALKNKGVQPLLDAVLEYLPNPTEVQNYAILNE--E 327

  Fly   458 GVEQLSTQVVGPEKEESKP-----EEADQNEFVFIAFARVFSGTLKRGMELFNLSPKHDPRQPTH 517
            |..:.|..::...:::::|     .:.:...|..:.:.||:.|.|::...:      |:.|  |.
Zfish   328 GESEGSKILMDSTRDDTQPFVGLAFKLEAGRFGQLTYVRVYQGCLRKTDYI------HNSR--TG 384

  Fly   518 RKEGEAPYASRVTIGDLYMFMGGELQLLDEVPAGNIVGIGGLE--SHIVKTATLSSSLDCTSFSE 580
            |         ||.:..|......:::.::...||:|..:.|::  |....||..:::|...|.. 
Zfish   385 R---------RVRVQRLVRLHADQMEDVEVAYAGDICALFGIDCASGDTFTARNNANLSMESIH- 439

  Fly   581 LSVMATPILRVAIEPVQPQDMPKLVKGLKLLNQADACVQVSV-APTGEHVITTLGEVHVEKCVHD 644
               :..|::.:||.|....|..||.||:....:.|...:|.. ..:.|.:|:.:||:|:|.....
Zfish   440 ---VPEPVISMAIRPSNKNDTDKLSKGISRFTREDPTFRVHFDTESKETIISGMGELHLEIYSQR 501

  Fly   645 LEQSYAKIKVNVSKPIVSFRETIVPAATVDMVNEAIVKTAEDKDVSKKIAVQQTLNKLGTLKVIA 709
            :|:.|:...| :.||.|:||||:..|...:..::.  ::.......|.|.|.:.|:         
Zfish   502 MEREYSCPCV-MGKPKVAFRETLTSAVPFEYTHKK--QSGGSGQYGKVIGVLEPLD--------- 554

  Fly   710 VPLPAEAVELLETHSEFFKELAAIPRNQLLSEKWTALLASIKVKLIAALKDLQLFGLSTLSPEEL 774
                                          ||.:|      ||:.                .:|.
Zfish   555 ------------------------------SENYT------KVEF----------------SDET 567

  Fly   775 VNRIWALGPRNCGTNILLNLSDYEQPDFWSSHAKSDTDIRSKTDPRKDFNSSLVNGFQITSVAGP 839
            |           ||||                             .|.|..::..||:.....||
Zfish   568 V-----------GTNI-----------------------------PKQFVPAVEKGFRDACEKGP 592

  Fly   840 LCEEPMQGVCFAVLEWSIQSEGEDLNSRGPFSGQV--LTAAKEVCRQAFQNQPQRLVTPMYSCNI 902
            |....:.||.|.:         ||.......|.::  :.|.:...:||.:.....::.|:.|..|
Zfish   593 LIGHKISGVRFVL---------EDGAHHMVDSNEISFIRAGEGAVKQALEKATVVILEPVMSVEI 648

  Fly   903 VVNAEMLGKMYAVIGRRHGKILSGDLTQGSGNFAVTCLLPVIESFNFAQEMRKQTSGLACPQLMF 967
            |...|..|.:.|.:.|||| ::||. ....|.|.:...:|:.:.|.:|.|:|..|.|.....:.:
Zfish   649 VAPNEFQGAVIAGVNRRHG-VISGQ-DGADGYFTLYADIPLNDMFGYATELRSCTEGKGEYTMEY 711

  Fly   968 SHWE 971
            |.::
Zfish   712 SRYQ 715

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33158NP_788515.1 PTZ00416 15..1016 CDD:240409 197/979 (20%)
EF2 20..249 CDD:206672 66/233 (28%)
EF2_II 485..572 CDD:293913 18/88 (20%)
EF2_snRNP_III 587..658 CDD:293918 20/71 (28%)
aeEF2_snRNP_like_IV 658..899 CDD:238839 40/242 (17%)
eEF2_snRNP_like_C 896..974 CDD:239763 23/76 (30%)
gfm1NP_001073463.1 EF-G 43..315 CDD:206673 88/435 (20%)
PRK12740 47..726 CDD:237186 193/971 (20%)
mtEFG1_II_like 347..427 CDD:293908 17/96 (18%)
EFG_III 441..516 CDD:293919 21/75 (28%)
EFG_mtEFG1_IV 519..635 CDD:238715 36/227 (16%)
mtEFG1_C 641..718 CDD:239764 23/77 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0480
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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