DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG33158 and CG4849

DIOPT Version :9

Sequence 1:NP_788515.1 Gene:CG33158 / 39834 FlyBaseID:FBgn0053158 Length:1033 Species:Drosophila melanogaster
Sequence 2:NP_651605.1 Gene:CG4849 / 43358 FlyBaseID:FBgn0039566 Length:975 Species:Drosophila melanogaster


Alignment Length:1047 Identity:276/1047 - (26%)
Similarity:457/1047 - (43%) Gaps:243/1047 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 VRNICILAHVDHGKTTLADSLVASNGIISQRMAGK-LRYLDNRSDEQERGITMKSSSISLYYQEA 82
            :||:.::.|:.|||||..|.|:.......:.|..: |||.|....|||||.::|::.::|..|:.
  Fly   131 IRNVALVGHLHHGKTTFVDCLIRQTHPQFETMEERQLRYTDTLFTEQERGCSIKATPVTLVLQDV 195

  Fly    83 EEMAGNPDYLINLIDSPGHVDFSSEVSTAVRLCDGAIVVVDVVEGVGPQTRACLRQIYEEQLKPV 147
            ::.:    ||:|:.|:||||:||.|.:.|:|:.||.::.:|..|||...|...|:...:|:....
  Fly   196 KQKS----YLLNIFDTPGHVNFSDEATAAMRMSDGVVLFIDAAEGVMLNTERLLKHAVQERQAIT 256

  Fly   148 LVLNKLDRLILEKQMDPLDAYFHLCQVLEQVNAVLGSIFASDILAKEDITKKDNYESALEEVDDS 212
            :.:||:||||||.::.|.||||.|..::|:||.:|.:..|.|          ||           
  Fly   257 VCINKIDRLILELKLPPQDAYFKLKHIVEEVNGLLSTYGAPD----------DN----------- 300

  Fly   213 ELYFSPSSGNVIFCSAYDGWAFSVRDFAAMYAKRLE-MSRKDLENVLWGDFYYNSKKKEALPGAQ 276
             |..||..|||.|.|:..|:.|:::.||.:||...| ::..|....||||.|:|||.::......
  Fly   301 -LLVSPILGNVCFASSLYGFCFTLKSFAKLYADTYEGVAYLDFAKRLWGDMYFNSKTRKFSKKQP 364

  Fly   277 EKAKKPMFVQFVLENIWSLYDIIAIRKDKD-KLPGIAEKLGLKLATRDLRLTDPKLQIKAVLGQW 340
            ..:.:..||:|:||.::.|  |..:..|.| .|.....:|.::::..::: ::.:..::.|..::
  Fly   365 HNSAQRSFVEFILEPMYKL--IAQVVGDVDTTLSDTLAELNVRVSKEEMK-SNIRPLLRLVCNRF 426

  Fly   341 LPIDKSVLHMVIQHVPPPHKISDERAQRLLYPANVDLSSLPPETLELKESFTSCDANSSNVIAFV 405
            :......:.|.::|:..|.    |.|:|     .||.....|:..::.....||:          
  Fly   427 MGDCSGFVDMCVEHIKSPL----ENAKR-----KVDHIYTGPKEGDIYRDMISCN---------- 472

  Fly   406 SKMTPVHITHLPQNRPKRLTDQEVQQRRDEVRRRIEERKQQSEQAELEKISQGVEQLSTQVVGPE 470
                                                                   |..|.:|   
  Fly   473 -------------------------------------------------------QYGTLMV--- 479

  Fly   471 KEESKPEEADQNEFVFIAFARVFSGTLKRGMEL------FNLSPKHDPRQPTHRKEGEAPYASRV 529
             ..||....|...| |...||:.||||..|.|:      :.|..:.|.|              .:
  Fly   480 -HSSKMYPNDDCTF-FQVLARIVSGTLHAGQEVRVLGENYTLQDEEDSR--------------IL 528

  Fly   530 TIGDLYMFMGGELQLLDEVPAGNIVGIGGLESHIVKTAT---LSSSLDCTSFSELSVMATPILRV 591
            .:|.|::|.......|:.|||||.|.|.|::..||||:|   ::...|...|..|......|:::
  Fly   529 QVGRLWVFESRYKVELNRVPAGNWVLIEGIDQCIVKTSTIVDINVPEDLYIFRPLKFNTQSIIKI 593

  Fly   592 AIEPVQPQDMPKLVKGLKLLNQADACVQVSVAPTGEHVITTLGEVHVEKCVHDLEQSYAKIKVNV 656
            |:|||.|.::||::.||:.:|::...:...|..:|||||...||::::..:|||.:.|::|.:.|
  Fly   594 AVEPVNPSELPKMLDGLRKVNKSYPLLSTRVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKV 658

  Fly   657 SKPIVSFRETIVPAATVDMVNEAIVKTAEDKDVSKKIAVQQTLNKLGTLKVIAVPLPAEAVELLE 721
            :.|:|:|.||:|..:::....|                   |.||...:.:|:.||.....|.:|
  Fly   659 ADPVVAFCETVVETSSLKCFAE-------------------TPNKKNKITMISEPLEKGLAEDIE 704

  Fly   722 THS-----------EFFKELAAIPRNQLLSEKWTALLASIKVKLIAALKDLQLFGLSTLSPEELV 775
            ..:           |||:          ::..|..|.|                           
  Fly   705 NGTVCINWNKKRIGEFFQ----------VNYDWDLLAA--------------------------- 732

  Fly   776 NRIWALGPRNCGTNILLNLSDYEQPDFWSSHAKSDTDIRSKTDPR-----KDFNSSLVNGFQITS 835
            ..|||.||.:.|.|||:                 |..:.|:.|..     ||   |:|.|||..:
  Fly   733 RSIWAFGPDSTGPNILV-----------------DDTLPSEVDKNLLTAVKD---SIVQGFQWGT 777

  Fly   836 VAGPLCEEPMQGVCFAVLEWSIQSEGEDLNSRGPFSGQVLTAAKEVCRQAFQNQPQRLVTPMYSC 900
            ..|||||||::.|.|.:|:..|.:|.  |:..|   ||::..|:.|...||.....||:.|....
  Fly   778 REGPLCEEPIRNVKFKILDGVIANEA--LHRGG---GQIIPTARRVAYSAFLMATPRLMEPYLFV 837

  Fly   901 NIVVNAEMLGKMYAVIGRRHGKILSGDLTQGSGNFAVTCLLPVIESFNFAQEMRKQTSGLACPQL 965
            .:...|:.:..:|.|:.||.|.:.......||..:.:...:|.|:||.|..::|..|.|.|....
  Fly   838 EVQAPADCVSAVYTVLARRRGHVTQDAPVSGSPIYTIKAFIPAIDSFGFETDLRTHTQGQAFCLS 902

  Fly   966 MFSHWEVIDIDPFWLPTTEEELMHFGEKADSANRAKVYMDSVRRRKGL--------FVDEQVVEH 1022
            :|.||:::..||.    .:..::...|...:::.|:.:|...||||||        |.|:.::..
  Fly   903 VFHHWQIVPGDPL----DKSIIIRPLEPQQASHLAREFMIKTRRRKGLSEDVSINKFFDDPMLLE 963

  Fly  1023 AEKQRTL 1029
            ..:|..|
  Fly   964 LARQDVL 970

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33158NP_788515.1 PTZ00416 15..1016 CDD:240409 273/1032 (26%)
EF2 20..249 CDD:206672 82/230 (36%)
EF2_II 485..572 CDD:293913 29/95 (31%)
EF2_snRNP_III 587..658 CDD:293918 25/70 (36%)
aeEF2_snRNP_like_IV 658..899 CDD:238839 63/256 (25%)
eEF2_snRNP_like_C 896..974 CDD:239763 21/77 (27%)
CG4849NP_651605.1 EFTUD2 4..111 CDD:292623
PTZ00416 115..957 CDD:240409 273/1032 (26%)
Snu114p 132..340 CDD:206730 82/233 (35%)
Translation_Factor_II_like 477..568 CDD:295476 33/109 (30%)
snRNP_III 589..660 CDD:293921 25/70 (36%)
EF2_IV_snRNP 660..837 CDD:238840 63/257 (25%)
eEF2_C_snRNP 832..911 CDD:239765 21/78 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464563
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0480
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140796at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42908
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

Return to query results.
Submit another query.