DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33158 and mRRF2

DIOPT Version :9

Sequence 1:NP_788515.1 Gene:CG33158 / 39834 FlyBaseID:FBgn0053158 Length:1033 Species:Drosophila melanogaster
Sequence 2:NP_732771.2 Gene:mRRF2 / 42670 FlyBaseID:FBgn0051159 Length:740 Species:Drosophila melanogaster


Alignment Length:1007 Identity:216/1007 - (21%)
Similarity:346/1007 - (34%) Gaps:360/1007 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 QVRNICILAHVDHGKTTLADSLVASNGIISQRMAGKLRYL----------DNRSDEQERGITMKS 72
            ::|||.||||:|.||||..:.::.        .|||.|.|          |..:.|:|||||:.|
  Fly    32 KIRNIGILAHIDAGKTTTTERMLF--------YAGKTRALGEVHRGNTVTDYLTQERERGITICS 88

  Fly    73 SSISLYYQEAEEMAGNPDYLINLIDSPGHVDFSSEVSTAVRLCDGAIVVVDVVEGVGPQTRACLR 137
            |:::..:.         |:.|||:|:|||:||:.||..::...||.:||:|...||..||.....
  Fly    89 SAVTFSWN---------DHRINLLDTPGHIDFTMEVEQSLYAVDGVVVVLDGTAGVEAQTVTVWS 144

  Fly   138 QIYEEQLKPVLVLNKLDRLILEKQMDPLDAYFHLCQVLEQVNAVLGSIFASDILAKEDITKKDNY 202
            |..:         :||.|||...:||..||.|..|              .||:        ||..
  Fly   145 QADK---------HKLPRLIFVNKMDRPDADFEKC--------------VSDL--------KDKL 178

  Fly   203 ESALEEVDDSELYFSPSSGNVIFCSAY-----DGWAFSVRDFAAMYAKRLEMSRKDLENVLWGDF 262
            |:            .|      .|..|     || ..::.|...:  :||...:|||     |..
  Fly   179 ET------------QP------VCLQYPVKNEDG-VLAINDVITL--ERLSWQQKDL-----GRS 217

  Fly   263 YYNSK--KKEALPGAQEKAKKPMFVQFVLENIWSLYDIIAIRKDKDKLPGIAEKLGLKLATRDLR 325
            |.|.|  ..:.|...|||..:.:.....|::  .|.|::...:..|.:.....:..|:.||    
  Fly   218 YRNVKLEPSDDLRLLQEKRNELIDQLSGLDD--ELADVVISTESFDNVDNALIERALRRAT---- 276

  Fly   326 LTDPKLQIKAVLGQWLPIDKSVLHMVIQHVPPPHKISDERAQRLLYPANVDLSSLPPETLELKES 390
             |..|: :..:||.                    ...:...|||:...|..|.: |.|..::.:.
  Fly   277 -TQQKV-VPVLLGS--------------------AYKNVGIQRLMDAVNAYLPA-PEERNQIYDC 318

  Fly   391 FTSCDANSSNVIAFVSKMTPVHITHLPQNRPKRLTDQEVQQRRDEVRRRIEERKQQSEQAELEKI 455
            |      .:.|...|.|:  ||                     |:.|                  
  Fly   319 F------GTEVAGKVFKI--VH---------------------DKQR------------------ 336

  Fly   456 SQGVEQLSTQVVGPEKEESKPEEADQNEFVFIAFARVFSGTLKRGMELFNLSPKHDPRQPTHRKE 520
                        ||                 :...|:..|.:||||.|.:             ..
  Fly   337 ------------GP-----------------LTLVRILRGEIKRGMRLIS-------------AR 359

  Fly   521 GEAPYASRVTIGDLYMFMGGELQLLDEVPAGNIVGIGGLESHIVKTATLSS-------------S 572
            |:|...|:     ||..:..|.:.:..|.:|::|...||:|.:......||             |
  Fly   360 GQAEVVSK-----LYEPLADEYREVSAVQSGDVVICAGLKSTVTGDLLTSSQSALKNAQKRYKQS 419

  Fly   573 LDCTS---------------FSELSVMATPILRVAIEPVQPQDMPKLVKGLKLLNQADACVQVSV 622
            |..|:               |:....:...:...:|||........:.:.||.|.:.|..::||.
  Fly   420 LGNTAAKVEEDDELDESDELFAIDPQIPDAVYFCSIEPPSVSSQTAMEQALKQLQREDPSLRVSY 484

  Fly   623 -APTGEHVITTLGEVHVEKCVHDLEQSYAKIKVNVSKPIVSFRETI-VPAATVDMVNEAIVKTAE 685
             :.||:.|:..:||:|::.....:...| ||.|::....::::||| .||.|...|.:.|..:.:
  Fly   485 DSVTGQTVLGGMGELHMDIIKSRILSEY-KIDVDLGPLQIAYKETIEAPALTTLSVEKEIAGSKQ 548

  Fly   686 DKDVSKKIAVQQTLNKLGTLKVIAVPLPAEAVELLETHSEFFKELAAIPRNQLLSEKWTALLASI 750
            ...:              ||:|:                          :||             
  Fly   549 SVSI--------------TLEVV--------------------------KNQ------------- 560

  Fly   751 KVKLIAALKDLQLFGLSTLSPEELVNRIWALGPRNCGTNILLNLSDYEQPDFWSSHAKSDTDIRS 815
                      .:||.|.. ||:.|.| :..|.||     ||..|                     
  Fly   561 ----------AELFSLDK-SPDNLPN-LNTLRPR-----ILQVL--------------------- 587

  Fly   816 KTDPRKDFNSSLVNGFQITSVAGPLCEEPMQGVCFAVLEWSIQSEGEDLNSRGPFSGQVLTAAKE 880
                ||...|:|..|   ..|.|            .|:|..|:.....: .||.....|:..|.:
  Fly   588 ----RKGSISALERG---PRVGG------------QVVETQIRLHNATI-GRGTADSFVMATAAQ 632

  Fly   881 VCRQAFQNQPQRLVTPMYSCNIVVNAEMLGKMYAVIGRRHGKILSGDLTQGSGNFAVTCLLPVIE 945
            ..::.......||:.|:.:..||..:|.:..:.|.:.||.. :::..|.:|..|..:....|:.|
  Fly   633 CVQKLLSTSGTRLLEPIMALQIVAPSERISGIMADLSRRRA-LINDVLPKGERNKMILVNAPLAE 696

  Fly   946 SFNFAQEMRKQTSGLACPQLM---FSHWEVID 974
            ...::..:|..:||.|...:.   ||....:|
  Fly   697 LSGYSSALRTISSGTASMTMQPCGFSSMNSVD 728

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33158NP_788515.1 PTZ00416 15..1016 CDD:240409 216/1007 (21%)
EF2 20..249 CDD:206672 72/243 (30%)
EF2_II 485..572 CDD:293913 21/99 (21%)
EF2_snRNP_III 587..658 CDD:293918 19/71 (27%)
aeEF2_snRNP_like_IV 658..899 CDD:238839 43/241 (18%)
eEF2_snRNP_like_C 896..974 CDD:239763 18/80 (23%)
mRRF2NP_732771.2 PRK12739 31..733 CDD:237185 216/1007 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464605
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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