DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33158 and eRF3

DIOPT Version :10

Sequence 1:NP_788515.1 Gene:CG33158 / 39834 FlyBaseID:FBgn0053158 Length:1033 Species:Drosophila melanogaster
Sequence 2:NP_477259.1 Gene:eRF3 / 34658 FlyBaseID:FBgn0020443 Length:619 Species:Drosophila melanogaster


Alignment Length:368 Identity:73/368 - (19%)
Similarity:133/368 - (36%) Gaps:103/368 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PVVEGSDLVLLQ--RRRQQVRNICILAHVDHGKTTLADSLVASNGIISQRMAGKLR--------- 55
            |.|....:|.::  |.:::..|:..:.|||.||:|:...:::..|::.:|...|..         
  Fly   176 PKVSKKKVVKVEENRSKREHVNVVFIGHVDAGKSTIGGQIMSLTGMVDKRTLEKYEREAREKSRE 240

  Fly    56 ------YLDNRSDEQERGITMKSSSISLYYQEAEEMAGNPDYLINLIDSPGHVDFSSEVSTAVRL 114
                  .||...:|:::|   |:..:...:.|.:...      ..::|:|||..|...:......
  Fly   241 SWYLSWALDTNQEERDKG---KTVEVGRAFFETDRKH------FTILDAPGHKSFVPNMIGGAAQ 296

  Fly   115 CDGAIVVVDVVEGV-------GPQTRACLRQIYEEQLKPVLVL-NKLDRLILEKQMDPL----DA 167
            .|.|::|:...:|.       |.|||..........:|.::|| ||:|        ||.    ..
  Fly   297 ADLAVLVISARKGEFETGFDRGGQTREHAMLAKTAGVKHLVVLVNKMD--------DPTVNWDQT 353

  Fly   168 YFHLCQVLEQVNAVLGSIFASDILAKEDI---TKKDNYESALEEVDDSELYFSPSSG-------- 221
            .::.|                    |:.|   .||..:..|      .:|.|.|.||        
  Fly   354 RYNEC--------------------KDKILPYLKKLGFNPA------KDLTFMPCSGLSGYGLKD 392

  Fly   222 --NVIFCSAYDGWAF--SVRDFAAMYAKR-------LEMSRKDLENVLWGDFYYNSKKKEALPGA 275
              ....|..|.|.||  .:.:..::..|.       :....||:..|:.|.....:.:|     .
  Fly   393 QIPETLCPWYRGPAFIPFIDELPSLNRKSDGPFIMPIVDKYKDMGTVVMGKVESGTARK-----G 452

  Fly   276 QEKAKKPMFVQFVLENIWS-LYDIIAI---RKDKDKLPGIAEK 314
            |.....|...|..::.::| .:::.::   ...|.||.||.|:
  Fly   453 QNLLVMPNRTQVAVDQLFSDDFEVTSVGPGENVKIKLKGIEEE 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33158NP_788515.1 PRK13351 15..1016 CDD:481252 69/353 (20%)
eRF3NP_477259.1 PAM2 12..28 CDD:429316
EF1_alpha 197..416 CDD:206670 53/261 (20%)
eRF3_II 424..505 CDD:293906 15/77 (19%)
eRF3_C_III 511..617 CDD:294003
Blue background indicates that the domain is not in the aligned region.

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