DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33158 and Efl1

DIOPT Version :9

Sequence 1:NP_788515.1 Gene:CG33158 / 39834 FlyBaseID:FBgn0053158 Length:1033 Species:Drosophila melanogaster
Sequence 2:NP_001101004.1 Gene:Efl1 / 308789 RGDID:1306521 Length:1127 Species:Rattus norvegicus


Alignment Length:1150 Identity:519/1150 - (45%)
Similarity:723/1150 - (62%) Gaps:143/1150 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VVEGSD-LVLLQRRRQQVRNICILAHVDHGKTTLADSLVASNGIISQRMAGKLRYLDNRSDEQER 66
            |:.|.| ::.||:....:||||:|||||||||||||.|::||||||.|:||||||:|:|.|||.|
  Rat     2 VLSGLDKMIQLQKNTANIRNICVLAHVDHGKTTLADCLISSNGIISSRLAGKLRYMDSREDEQVR 66

  Fly    67 GITMKSSSISLYYQEAEEMAGNPDYLINLIDSPGHVDFSSEVSTAVRLCDGAIVVVDVVEGVGPQ 131
            |||||||:|||:|.|     |:.:|||||||||||||||||||||||:|||.|:|||.||||.||
  Rat    67 GITMKSSAISLHYAE-----GSEEYLINLIDSPGHVDFSSEVSTAVRICDGCIIVVDAVEGVCPQ 126

  Fly   132 TRACLRQIYEEQLKPVLVLNKLDRLILEKQMDPLDAYFHLCQVLEQVNAVLGSIFASDIL----- 191
            |:|.|||.:.|.::||||:||:||||:|.:..|.:||.||..:|.|:||:.|::|.|.:|     
  Rat   127 TQAVLRQAWLENIRPVLVINKIDRLIVELKFTPQEAYSHLKNILGQINALTGTLFTSKVLEERAE 191

  Fly   192 ------AKEDITKKD---NYESALEEVDDSELYFSPSSGNVIFCSAYDGWAFSVRDFAAMYAKRL 247
                  ||....:.|   ::.:.||:||||:|||||..|||:|.||.|||.|.:..||.:|::::
  Rat   192 RETESQAKSHSEQGDQVYDWSTGLEDVDDSQLYFSPEQGNVVFTSAIDGWGFGIEHFARIYSQKI 256

  Fly   248 EMSRKDLENVLWGDFYYNSKKKEALPGAQEKAKKPMFVQFVLENIWSLYDIIAIRKDKDKLPGIA 312
            .:.::.|...||||:|.|.|.|:.:...|.|.|||:|||.:|||||||||.: ::|||:|:..|.
  Rat   257 GIKKEVLLKTLWGDYYINMKAKKIMKVDQAKGKKPLFVQLILENIWSLYDAV-LKKDKEKVDKIV 320

  Fly   313 EKLGLKLATRDLRLTDPKLQIKAVLGQWLPIDKSVLHMVIQHVPPPHKISDERAQRLLYPANVDL 377
            ..||||:..|:.|.:|||:||.|:..|||||..:||.||.|.:|.|..::.||.::|:...:...
  Rat   321 TSLGLKIGAREARHSDPKVQINAICSQWLPISHAVLAMVCQKLPSPLDMTSERVEKLMCTGSQTF 385

  Fly   378 SSLPPETLELKESFTSCDA-NSSNVIAFVSKMTPVHITHLPQNRPKRLTDQEVQQRRDEVRRRIE 441
            .|||.||..||.:|..|.: :::.||.|||||..|.:..||||:|:.||.:|:.|||:..|:|..
  Rat   386 ESLPLETQALKAAFMKCGSEDTAPVIIFVSKMFAVDVKALPQNKPRPLTQEEMAQRRERARQRHA 450

  Fly   442 ERKQQSEQAELEKISQGVEQLSTQVVGPEKEESKPEEAD-------------QNEFVFIAFARVF 493
            |:...::....:..:|....|.|   .|:::|.:.||.|             .::..||||||||
  Rat   451 EKLAAAQGQAPQGPTQDGGALET---SPQEDEPRGEEPDMTSVSRQPAPQEESSQEAFIAFARVF 512

  Fly   494 SGTLKRGMELFNLSPKHDP-----RQPTHRKEG---------EAPYASRVTIGDLYMFMGGELQL 544
            ||..:||.::|.|.||:.|     |.|    :|         ..|:.:..|:.:||:.||.||:.
  Rat   513 SGVARRGKKIFVLGPKYSPVDFLQRVP----QGFSAPLEDLPPVPHMACCTLENLYLLMGRELED 573

  Fly   545 LDEVPAGNIVGIGGLESHIVKTATLSSSLDCTSFSELSVMATPILRVAIEPVQPQDMPKLVKGLK 609
            |:|||.||::|||||:..::|:|||.|...|..|..|:..||||:|||:||..|.:||:||||:|
  Rat   574 LEEVPPGNVLGIGGLQDSVLKSATLCSLPSCPPFIPLNFEATPIVRVAVEPKHPSEMPQLVKGMK 638

  Fly   610 LLNQADACVQVSVAPTGEHVITTLGEVHVEKCVHDLEQSYAKIKVNVSKPIVSFRETIVPAATVD 674
            ||||||.|||:.:..|||||:.|.||||:::|:.||.:.:|||.::||:||:.|||||.....||
  Rat   639 LLNQADPCVQILIQETGEHVLVTAGEVHLQRCLDDLRERFAKIHISVSEPIIPFRETITKPPKVD 703

  Fly   675 MVNEAI---VKTA-------EDKDVSKKIAVQQ-------TLNKLGTLKVIAVPLPAEAVELLET 722
            ||||.|   .|.|       |...:.:.|.|..       |.|||.||.|.|:|||.|...:||.
  Rat   704 MVNEEIGRQQKVAVIHQTKEEQSKIPEGILVDSDGLITIPTPNKLATLSVRAIPLPEEVTRILEE 768

  Fly   723 HSEFFKELAAIP------RN-QLLSEKWTALLASIKVKLIAALKDLQLFGLSTLSPEELVNRIWA 780
            :|:..:.:..:.      || |.:.:|....:...|.||     :..|.|...   ...|::||:
  Rat   769 NSDLIRSMELLTSSLNEGRNTQAIHQKTQEKIWEFKGKL-----EKHLTGRKW---RNTVDQIWS 825

  Fly   781 LGPRNCGTNILLNLSDYEQPDFWSSHAKSDTDIRSKTDPRKDFNSSLVNGFQITSVAGPLCEEPM 845
            .|||.||.|||::.|:..|...||..|..::...|:.   :||.:|:|:|||:.:::||:||||:
  Rat   826 FGPRKCGPNILVSRSEDFQSSVWSGPAGRESKEASRF---RDFGNSIVSGFQLATLSGPMCEEPL 887

  Fly   846 QGVCFAVLEWSI-----------QSEGE-DLNSR------------------------------- 867
            .||||.:.:|.:           ||:|: ||...                               
  Rat   888 MGVCFVLEKWELNKCAEPGASDKQSQGQCDLTGEGQEKSKTCPVGDENQEQQDGYSEPFEETSQK 952

  Fly   868 ---------GPFSGQVLTAAKEVCRQAFQNQPQRLVTPMYSCNIVVNAEMLGKMYAVIGRRHGKI 923
                     ||||||::...||.||.|.|.:||||:..||:|:|:..:::||::|||:.:|.|::
  Rat   953 GDSPVIDCYGPFSGQLIATMKEACRYALQVKPQRLMAAMYTCDIMATSDVLGRVYAVLSKREGRV 1017

  Fly   924 LSGDLTQGSGNFAVTCLLPVIESFNFAQEMRKQTSGLACPQLMFSHWEVIDIDPFWLPTTEEELM 988
            |..::.:|:..|.:..:|||.|||.||.|:||:|||||.|||:|||||||..||||:||||||.:
  Rat  1018 LQEEMKEGTDMFIIKAVLPVAESFGFADEIRKRTSGLASPQLVFSHWEVIPSDPFWVPTTEEEYL 1082

  Fly   989 HFGEKADSANRAKVYMDSVRRRKGLFVDEQVVEHAEKQRTLSKNK 1033
            ||||||||.|:|:.||::||:||||:|:|::||||||||||||||
  Rat  1083 HFGEKADSENQARKYMNAVRKRKGLYVEEKIVEHAEKQRTLSKNK 1127

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33158NP_788515.1 PTZ00416 15..1016 CDD:240409 498/1118 (45%)
EF2 20..249 CDD:206672 143/242 (59%)
EF2_II 485..572 CDD:293913 43/100 (43%)
EF2_snRNP_III 587..658 CDD:293918 41/70 (59%)
aeEF2_snRNP_like_IV 658..899 CDD:238839 100/316 (32%)
eEF2_snRNP_like_C 896..974 CDD:239763 39/77 (51%)
Efl1NP_001101004.1 PTZ00416 1..1110 CDD:240409 503/1131 (44%)
EF2 20..253 CDD:206672 142/237 (60%)
EF2_II 505..600 CDD:293913 43/98 (44%)
EF2_snRNP_III 616..687 CDD:293918 41/70 (59%)
aeEF2_snRNP_like_IV 687..993 CDD:238839 100/316 (32%)
eEF2_snRNP_like_C 990..1068 CDD:239763 39/77 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166341723
Domainoid 1 1.000 289 1.000 Domainoid score I1497
eggNOG 1 0.900 - - E1_COG0480
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11599
Inparanoid 1 1.050 938 1.000 Inparanoid score I331
OMA 1 1.010 - - QHG53952
OrthoDB 1 1.010 - - D140796at2759
OrthoFinder 1 1.000 - - FOG0004608
OrthoInspector 1 1.000 - - oto97412
orthoMCL 1 0.900 - - OOG6_102502
Panther 1 1.100 - - LDO PTHR42908
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3227
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.770

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