DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG33158 and Eef2

DIOPT Version :9

Sequence 1:NP_788515.1 Gene:CG33158 / 39834 FlyBaseID:FBgn0053158 Length:1033 Species:Drosophila melanogaster
Sequence 2:NP_058941.1 Gene:Eef2 / 29565 RGDID:61979 Length:858 Species:Rattus norvegicus


Alignment Length:1037 Identity:314/1037 - (30%)
Similarity:482/1037 - (46%) Gaps:245/1037 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 RRQQVRNICILAHVDHGKTTLADSLVASNGIISQRMAGKLRYLDNRSDEQERGITMKSSSISLYY 79
            ::..:||:.::|||||||:||.||||...|||:...||:.|:.|.|.|||||.||:||::|||:|
  Rat    15 KKANIRNMSVIAHVDHGKSTLTDSLVCKAGIIASARAGETRFTDTRKDEQERCITIKSTAISLFY 79

  Fly    80 QEAE-------EMAGNPDYLINLIDSPGHVDFSSEVSTAVRLCDGAIVVVDVVEGVGPQTRACLR 137
            :.:|       :......:|||||||||||||||||:.|:|:.|||:||||.|.||..||...||
  Rat    80 ELSENDLNFIKQSKDGSGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSGVCVQTETVLR 144

  Fly   138 QIYEEQLKPVLVLNKLDRLILEKQMDPLDAYFHLCQVLEQVNAVLGSIFASDILAKEDITKKDNY 202
            |...|::||||::||:||.:||.|::|.:.|....:::|.||.::.:                 |
  Rat   145 QAIAERIKPVLMMNKMDRALLELQLEPEELYQTFQRIVENVNVIIST-----------------Y 192

  Fly   203 ESALEEVDDSELYFSPSSGNVIFCSAYDGWAFSVRDFAAMY-----------------AKRLEMS 250
            ... |......:...|..|.|.|.|...||||:::.||.||                 ||::|  
  Rat   193 GEG-ESGPMGNIMIDPVLGTVGFGSGLHGWAFTLKQFAEMYVAKFAAKGEGQLGAAERAKKVE-- 254

  Fly   251 RKDLENVLWGDFYY---NSKKKEALPGAQEKAKKPMFVQFVLENIWSLYDIIAIRKDKDKLPGIA 312
              |:...||||.|:   |.|..::......|.....|.|.:|:.|:.::|.| :...|::...:.
  Rat   255 --DMMKKLWGDRYFDPANGKFSKSANSPDGKKLPRTFCQLILDPIFKVFDAI-MNFRKEETAKLI 316

  Fly   313 EKLGLKLATRDLRLTDPKLQIKAVLGQWLPIDKSVLHMVIQHVPPPHKISDERAQRLLYPANVDL 377
            |||.:||.:.| :..:.|..:|||:.:|||...::|.|:..|:|.|......|.: |||..    
  Rat   317 EKLDIKLDSED-KDKEGKPLLKAVMRRWLPAGDALLQMITIHLPSPVTAQKYRCE-LLYEG---- 375

  Fly   378 SSLPPETLELKESFTSCDANSSNVIAFVSKMTPVHITHLPQNRPKRLTDQEVQQRRDEVRRRIEE 442
               ||:. |......|||.... ::.::|||.|.                               
  Rat   376 ---PPDD-EAAMGIKSCDPKGP-LMMYISKMVPT------------------------------- 404

  Fly   443 RKQQSEQAELEKISQGVEQLSTQVVGPEKEESKPEEADQNEFVFIAFARVFSGTLKRGMELFNLS 507
                                                :|:..  |.||.|||||.:..|:::..:.
  Rat   405 ------------------------------------SDKGR--FYAFGRVFSGVVSTGLKVRIMG 431

  Fly   508 PKHDPRQPTHRKEGEAPYASRVTIGDLY--------MFMGGELQLLDEVPAGNIVGIGGLESHIV 564
            |.:.|    .:||            |||        :.||..::.:::||.|||||:.|::..:|
  Rat   432 PNYTP----GKKE------------DLYLKPIQRTILMMGRYVEPIEDVPCGNIVGLVGVDQFLV 480

  Fly   565 KTATLSSSLDCTSFSELSVMATPILRVAIEPVQPQDMPKLVKGLKLLNQADACVQVSVAPTGEHV 629
            ||.|:::.....:...:....:|::|||:|...|.|:||||:|||.|.::|..||..:..:|||:
  Rat   481 KTGTITTFEHAHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIIEESGEHI 545

  Fly   630 ITTLGEVHVEKCVHDLEQSYAKIKVNVSKPIVSFRETIVPAATVDMVNEAIVKTAEDKDVSKKIA 694
            |...||:|:|.|:.|||:.:|.|.:..|.|:||:|||:                :|:.:|   :.
  Rat   546 IAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETV----------------SEESNV---LC 591

  Fly   695 VQQTLNKLGTLKVIAVPLP---AEAVELLETHSEFFKELAAIPRNQLLSEKWTALLASIKVKLIA 756
            :.::.||...|.:.|.|.|   ||.::..|..:.  :||.|  |.:.|:||:...:|..:     
  Rat   592 LSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSAR--QELKA--RARYLAEKYEWDVAEAR----- 647

  Fly   757 ALKDLQLFGLSTLSPEELVNRIWALGPRNCGTNILLNLSDYEQPDFWSSHAKSDTDIRSKTDPRK 821
                                :||..||...|.|||                   |||........
  Rat   648 --------------------KIWCFGPDGTGPNIL-------------------TDITKGVQYLN 673

  Fly   822 DFNSSLVNGFQITSVAGPLCEEPMQGVCFAVLEWSIQSEGEDLNSRGPFSGQVLTAAKEVCRQAF 886
            :...|:|.|||..:..|.||||.|:||.|.|.:.::.:   |...||  .||::..|:.....:.
  Rat   674 EIKDSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHA---DAIHRG--GGQIIPTARRCLYASV 733

  Fly   887 QNQPQRLVTPMYSCNIVVNAEMLGKMYAVIGRRHGKILSGDLTQGSGNFAVTCLLPVIESFNFAQ 951
            .....||:.|:|...|....:::|.:|.|:.|:.|.:.......|:..|.|...|||.|||.|..
  Rat   734 LTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVVKAYLPVNESFGFTA 798

  Fly   952 EMRKQTSGLACPQLMFSHWEVIDIDPFWLPTTEEELMHFGEKADSANRAKVYMDSVRRRKGL 1013
            ::|..|.|.|.||.:|.||:::..|||                |:::|....:...|:||||
  Rat   799 DLRSNTGGQAFPQCVFDHWQILPGDPF----------------DNSSRPSQVVAETRKRKGL 844

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG33158NP_788515.1 PTZ00416 15..1016 CDD:240409 314/1037 (30%)
EF2 20..249 CDD:206672 105/252 (42%)
EF2_II 485..572 CDD:293913 30/94 (32%)
EF2_snRNP_III 587..658 CDD:293918 32/70 (46%)
aeEF2_snRNP_like_IV 658..899 CDD:238839 60/243 (25%)
eEF2_snRNP_like_C 896..974 CDD:239763 27/77 (35%)
Eef2NP_058941.1 PTZ00416 1..858 CDD:240409 314/1037 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0480
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D140796at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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