DRSC/TRiP Functional Genomics Resources

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Protein Alignment TyrRS and mars2

DIOPT Version :9

Sequence 1:NP_648895.1 Gene:TyrRS / 39829 FlyBaseID:FBgn0027080 Length:525 Species:Drosophila melanogaster
Sequence 2:XP_021329980.1 Gene:mars2 / 566565 ZFINID:ZDB-GENE-111201-1 Length:595 Species:Danio rerio


Alignment Length:232 Identity:49/232 - (21%)
Similarity:83/232 - (35%) Gaps:71/232 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ITPAEKKALITRNLQETLGDDKLTKILAERD-LKIYWGTATTGKPHVAYFVPMSKIADFLKAGCE 67
            |.|.:.:.|:.:.|:    ||.:..:...|. .::.||....|.|....:|.:..:.::|     
Zfish   232 IQPVKFQHLVLQWLE----DDDIPDLSVSRQKSRLQWGIPVPGDPEQTIYVWLDALVNYL----- 287

  Fly    68 VTILFADLHAYLDNMKAPWS---------LLELRTKYYEQVI---------------------KA 102
             |::     .|..|....||         :|:....|:...:                     |.
Zfish   288 -TVV-----GYPQNHSKWWSVVHHVVGKDILKFHAIYWPAFLLAAGLALPQKIYVHSHWTVEGKK 346

  Fly   103 MLSSIG---VPLEKL-KF-VKGSDYQLSK----EYTLDVY--KLSSVVTQHDAKKAGAEV----- 151
            |..|||   .|||.: || |.|..|.|.:    :...|.|  |:..:.....|...|..:     
Zfish   347 MSKSIGNVINPLESIEKFTVDGLRYFLLRQGVPDSDCDYYDDKVMKMCNSELADALGGLLNRCTA 411

  Fly   152 ----VKQVEYPLLSGLLYPGL----QALDEEYLKVDA 180
                :.|| ||..|...:|.:    :|:.|:|..::|
Zfish   412 PSLNLTQV-YPRFSNSCFPAVGLSGKAVSEDYRMIEA 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRSNP_648895.1 nt_trans 8..334 CDD:294020 47/228 (21%)
tyrS 12..332 CDD:272976 47/224 (21%)
tRNA_bind_EMAP-II_like 364..466 CDD:239198
mars2XP_021329980.1 PRK12267 45..594 CDD:330948 49/232 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0143
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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