DRSC/TRiP Functional Genomics Resources

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Protein Alignment TyrRS and yars1

DIOPT Version :9

Sequence 1:NP_648895.1 Gene:TyrRS / 39829 FlyBaseID:FBgn0027080 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_001004987.1 Gene:yars1 / 448444 XenbaseID:XB-GENE-491608 Length:528 Species:Xenopus tropicalis


Alignment Length:527 Identity:348/527 - (66%)
Similarity:415/527 - (78%) Gaps:8/527 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 GITPAEKKALITRNLQETLGDDKLTKILAERDLKIYWGTATTGKPHVAYFVPMSKIADFLKAGCE 67
            |:||..|..||||||||.||:||:.:||.||.|:|||||||||||||||||||||||||||||||
 Frog     4 GLTPEGKAQLITRNLQEVLGEDKMKEILKERPLRIYWGTATTGKPHVAYFVPMSKIADFLKAGCE 68

  Fly    68 VTILFADLHAYLDNMKAPWSLLELRTKYYEQVIKAMLSSIGVPLEKLKFVKGSDYQLSKEYTLDV 132
            |||||||||||||||||||.||||||:||||||:|||.|||||||:|:|::|:::||||||||||
 Frog    69 VTILFADLHAYLDNMKAPWDLLELRTRYYEQVIQAMLQSIGVPLERLRFIRGTEFQLSKEYTLDV 133

  Fly   133 YKLSSVVTQHDAKKAGAEVVKQVEYPLLSGLLYPGLQALDEEYLKVDAQFGGVDQRKIFTFSEKY 197
            |:||||||||||||||||||||||:||||||||||||||||||||||||||||||||||||:|||
 Frog   134 YRLSSVVTQHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQFGGVDQRKIFTFAEKY 198

  Fly   198 LPQLGYEKRIHFMNPMVPGLAGGKMSSSEEDSKIDLLDSPANVKKKLKKAFCEPGNIADNGLLSF 262
            ||.|||.||||.||||||||.|.|||||||:||||||||||:|||||||||||||||.:||:|||
 Frog   199 LPALGYAKRIHLMNPMVPGLTGAKMSSSEEESKIDLLDSPADVKKKLKKAFCEPGNIENNGVLSF 263

  Fly   263 VKHVLFSLFKEGEGFEVNREAEHGGDVTFLKYEDLEKYYAEDKLHPGDLKATVEKYINRLLDPIR 327
            |:||||.|..|   |.|.|:.:.||:.|:..:|.|||.:.|..:|||||||:|||.:|:||||||
 Frog   264 VRHVLFPLKSE---FVVLRDEKFGGNKTYTDFETLEKDFTEQLVHPGDLKASVEKALNKLLDPIR 325

  Fly   328 KAFENPELQKLSAAAYPPPAKVKA---GAAPAAGADEDAPHRLDIRVGKVVEVARHPDADTLYVL 389
            :.|.:||::|||..|||..:|.|.   |:...:|.:|..|..||:||||::.|.:|||||:|||.
 Frog   326 EKFNSPEMKKLSNDAYPGASKQKTVPKGSTKNSGPEEIDPSLLDLRVGKILSVRQHPDADSLYVE 390

  Fly   390 KIDLAEAQPRTIISGLVKFVTEEELNQRLVAVLCNLKPSKMRGILSEGMVLCTS-NADHTVVEPI 453
            .:|:.|..||.::||||::|..::|..|.|.:||||||.|||||.|:||:||.| ..:...|||:
 Frog   391 SVDVGEENPRCVVSGLVQYVPSDQLLGRSVVLLCNLKPQKMRGIESQGMLLCASTEGEQKQVEPL 455

  Fly   454 VLPATATAGSRLSFEGF-SGTPDEQLNPKKKVWEKLSADFKTNSDGLAVWKDNFLLTPEGEKLSS 517
            ..|..:..|.|:..||: :|.|:.:|.|||||:|||..||:.:.|..|.||....||..|.....
 Frog   456 DPPTGSAPGERIYIEGYENGEPEGELKPKKKVFEKLQVDFRISDDLCAQWKGKNFLTKLGSVTCK 520

  Fly   518 KLANCSI 524
            .|...||
 Frog   521 TLRGGSI 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRSNP_648895.1 nt_trans 8..334 CDD:294020 256/325 (79%)
tyrS 12..332 CDD:272976 255/319 (80%)
tRNA_bind_EMAP-II_like 364..466 CDD:239198 51/102 (50%)
yars1NP_001004987.1 nt_trans 8..337 CDD:320711 259/331 (78%)
'HIGH' region. /evidence=ECO:0000250 44..52 7/7 (100%)
'KMSKS' region. /evidence=ECO:0000250 222..226 3/3 (100%)
PRK12267 <271..528 CDD:330948 120/260 (46%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 335..364 11/28 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 478 1.000 Domainoid score I423
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2730
Inparanoid 1 1.050 685 1.000 Inparanoid score I695
OMA 1 1.010 - - QHG54288
OrthoDB 1 1.010 - - D557463at33208
OrthoFinder 1 1.000 - - FOG0000771
OrthoInspector 1 1.000 - - otm48629
Panther 1 1.100 - - LDO PTHR11586
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1461
SonicParanoid 1 1.000 - - X2335
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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