DRSC/TRiP Functional Genomics Resources

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Protein Alignment TyrRS and yars1

DIOPT Version :9

Sequence 1:NP_648895.1 Gene:TyrRS / 39829 FlyBaseID:FBgn0027080 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_958473.1 Gene:yars1 / 368235 ZFINID:ZDB-GENE-030425-2 Length:529 Species:Danio rerio


Alignment Length:515 Identity:354/515 - (68%)
Similarity:421/515 - (81%) Gaps:9/515 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ITPAEKKALITRNLQETLGDDKLTKILAERDLKIYWGTATTGKPHVAYFVPMSKIADFLKAGCEV 68
            ::|.||..||||||||.||:::|.:||.||:||:|||||||||||||||||||||||||||||||
Zfish     5 LSPDEKFQLITRNLQEVLGEERLKEILKERELKVYWGTATTGKPHVAYFVPMSKIADFLKAGCEV 69

  Fly    69 TILFADLHAYLDNMKAPWSLLELRTKYYEQVIKAMLSSIGVPLEKLKFVKGSDYQLSKEYTLDVY 133
            ||||||||||||||||||.|||||.|||||||||||.||||||:|||||||:|||||:|||||||
Zfish    70 TILFADLHAYLDNMKAPWELLELRVKYYEQVIKAMLESIGVPLDKLKFVKGTDYQLSREYTLDVY 134

  Fly   134 KLSSVVTQHDAKKAGAEVVKQVEYPLLSGLLYPGLQALDEEYLKVDAQFGGVDQRKIFTFSEKYL 198
            :|||:||:|||||||||||||||:|||||||||||||||||||||||||||||||||||.:||||
Zfish   135 RLSSMVTEHDAKKAGAEVVKQVEHPLLSGLLYPGLQALDEEYLKVDAQFGGVDQRKIFTLAEKYL 199

  Fly   199 PQLGYEKRIHFMNPMVPGLAGGKMSSSEEDSKIDLLDSPANVKKKLKKAFCEPGNIADNGLLSFV 263
            |.|||.||.|.||||||||.|.|||||||:|||||||...:||||||||||||||:.:||:||||
Zfish   200 PSLGYTKRSHLMNPMVPGLTGSKMSSSEEESKIDLLDKNQDVKKKLKKAFCEPGNVENNGVLSFV 264

  Fly   264 KHVLFSLFKEGEGFEVNREAEHGGDVTFLKYEDLEKYYAEDKLHPGDLKATVEKYINRLLDPIRK 328
            |||||.|..|   |.:.|:.:.|||..:..:|::||.:|.:::|||||||:||..:|:|||||||
Zfish   265 KHVLFPLHSE---FVIKRDPKFGGDKVYTDFEEVEKDFAAEQIHPGDLKASVELALNKLLDPIRK 326

  Fly   329 AFENPELQKLSAAAYPPPAKVKAGAA--PAAGADED--APHRLDIRVGKVVEVARHPDADTLYVL 389
            .||:|||:||:::|||.|:|.|.||.  |....|:|  .|.|||||||||:.|.:|||||:||:.
Zfish   327 KFESPELKKLTSSAYPEPSKNKGGAKGNPKQTTDDDEVIPSRLDIRVGKVISVEKHPDADSLYLE 391

  Fly   390 KIDLAEAQPRTIISGLVKFVTEEELNQRLVAVLCNLKPSKMRGILSEGMVLCTS-NADHTVVEPI 453
            |||:.|.||||::||||.::|||:|..|||.:||||||.|||||.|:.||||.| ..:...|||:
Zfish   392 KIDVGEEQPRTVVSGLVAYITEEQLQDRLVVLLCNLKPQKMRGIESQAMVLCASIEGEPRKVEPL 456

  Fly   454 VLPATATAGSRLSFEGF-SGTPDEQLNPKKKVWEKLSADFKTNSDGLAVWKDNFLLTPEG 512
            ..|..:.||.|:..||: ||.||::|.|||||:|||..|.|.:.:.:|.||:..|:|..|
Zfish   457 DPPEGSAAGDRVYVEGYESGKPDDELKPKKKVFEKLQVDLKISGEFVAQWKEQNLMTKLG 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRSNP_648895.1 nt_trans 8..334 CDD:294020 253/325 (78%)
tyrS 12..332 CDD:272976 250/319 (78%)
tRNA_bind_EMAP-II_like 364..466 CDD:239198 61/102 (60%)
yars1NP_958473.1 nt_trans 8..336 CDD:320711 256/330 (78%)
'HIGH' region. /evidence=ECO:0000250 44..52 7/7 (100%)
'KMSKS' region. /evidence=ECO:0000250 222..226 3/3 (100%)
PRK12267 <293..529 CDD:330948 123/224 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 335..362 12/26 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170596440
Domainoid 1 1.000 473 1.000 Domainoid score I421
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2730
Inparanoid 1 1.050 701 1.000 Inparanoid score I647
OMA 1 1.010 - - QHG54288
OrthoDB 1 1.010 - - D557463at33208
OrthoFinder 1 1.000 - - FOG0000771
OrthoInspector 1 1.000 - - oto41633
orthoMCL 1 0.900 - - OOG6_101224
Panther 1 1.100 - - LDO PTHR11586
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2335
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.870

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