DRSC/TRiP Functional Genomics Resources

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Protein Alignment TyrRS and Aimp1

DIOPT Version :9

Sequence 1:NP_648895.1 Gene:TyrRS / 39829 FlyBaseID:FBgn0027080 Length:525 Species:Drosophila melanogaster
Sequence 2:NP_031952.2 Gene:Aimp1 / 13722 MGIID:102774 Length:319 Species:Mus musculus


Alignment Length:337 Identity:110/337 - (32%)
Similarity:175/337 - (51%) Gaps:56/337 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 GKMSSSEEDSKIDLLDSPANVKKKLKKAFCEPGNIADNGLLSFVKHVLFSLFKEGEGFEVNREAE 284
            |||::::.            |.|:|:    :.|..||. ::.::|..: :|.||....:.....|
Mouse     8 GKMATNDA------------VLKRLE----QKGAEADQ-IIEYLKQQV-ALLKEKAILQATMREE 54

  Fly   285 HGGDVTFLK----YEDLEKYYAEDKLHPGDLKATVEKYINRLLDPIRKAFENPE--LQKLSAAAY 343
            ....|...|    .|:|::.....::|.|     ||:...||..|::......|  :|..|.|..
Mouse    55 KKLRVENAKLKKEIEELKQELILAEIHNG-----VEQVRVRLSTPLQTNCTASESVVQSPSVATT 114

  Fly   344 PPPA---KVKAG------------------AAPAAGADEDAP---HRLDIRVGKVVEVARHPDAD 384
            ..||   ::|||                  ...||.:.:..|   .|||:|:|.:|...:|||||
Mouse   115 ASPATKEQIKAGEEKKVKEKTEKKGEKKEKQQSAAASTDSKPIDASRLDLRIGCIVTAKKHPDAD 179

  Fly   385 TLYVLKIDLAEAQPRTIISGLVKFVTEEELNQRLVAVLCNLKPSKMRGILSEGMVLCTSNADHTV 449
            :|||.::|:.||.|||::||||..|..|::..|:|.:||||||:||||:||:.||:|.|:.:.  
Mouse   180 SLYVEEVDVGEAAPRTVVSGLVNHVPLEQMQNRMVVLLCNLKPAKMRGVLSQAMVMCASSPEK-- 242

  Fly   450 VEPIVLPATATAGSRLSFEGFSGTPDEQLNPKKKVWEKLSADFKTNSDGLAVWKD-NFLLTPEGE 513
            ||.:..|..:..|.|::|:.|.|.||::||||||:||::..|..||::.:|.:|. .|.:..:|.
Mouse   243 VEILAPPNGSVPGDRITFDAFPGEPDKELNPKKKIWEQIQPDLHTNAECVATYKGAPFEVKGKGV 307

  Fly   514 KLSSKLANCSIK 525
            ..:..:||..||
Mouse   308 CRAQTMANSGIK 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TyrRSNP_648895.1 nt_trans 8..334 CDD:294020 25/117 (21%)
tyrS 12..332 CDD:272976 25/115 (22%)
tRNA_bind_EMAP-II_like 364..466 CDD:239198 50/104 (48%)
Aimp1NP_031952.2 NUDE_C 17..>117 CDD:282704 25/110 (23%)
tRNA_bind_EMAP-II_like 157..259 CDD:239198 49/103 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0143
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000771
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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