DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GluRS-m and Qars

DIOPT Version :9

Sequence 1:NP_648894.2 Gene:GluRS-m / 39828 FlyBaseID:FBgn0036629 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_598555.2 Gene:Qars / 97541 MGIID:1915851 Length:775 Species:Mus musculus


Alignment Length:561 Identity:118/561 - (21%)
Similarity:190/561 - (33%) Gaps:196/561 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LMQQCLRHAHSQVRVRFAPSPTGYLHLGGLRTALYNFLYARHLGGKFLLRIEDTDQTRLVPGASE 73
            |::|.|.....|||.||.|.|.|.||:|..:...:||.||:...|...||.:||:..:.......
Mouse   252 LLKQHLEITGGQVRTRFPPEPNGILHIGHAKAINFNFGYAKANNGICFLRFDDTNPEKEEAKFFT 316

  Fly    74 RLVEDLLWAGIEIDEGPGFGGQLGPYVQSQRT----EIYSKAIEELLHNGTAYRCFCTERRL--- 131
            .:.:.:.|.|..            ||..:..:    ::|:.|: ||:|.|.||.|......|   
Mouse   317 AIYDMVTWLGYT------------PYKVTYASDYFDQLYAWAV-ELIHGGLAYVCHQRVEELKGH 368

  Fly   132 --------------DLLRKEALRTRQVPRYDNKCRHLTTSEVDSLLAKGTPYCIRFKLTDHEEPL 182
                          .||..||:|..:                   .|:|.. .:|.||...:..:
Mouse   369 NPLPSPWRDRPKEESLLLFEAMRKGK-------------------FAEGEA-TLRMKLVMEDGKM 413

  Fly   183 DDLIYGKV----HHNVSDNEGDPVVMKSDQFPTYHFANVVDDHLMGITHVLRGVEWQISTTKH-- 241
            |.:.| :|    ||...|        |...:|||.:.:.:.|.:..|||.|...|:|...:.:  
Mouse   414 DPVAY-RVKYTPHHRTGD--------KWCIYPTYDYTHCLCDSIEHITHSLCTKEFQARRSSYFW 469

  Fly   242 ----LLLYKAFGWQPPKFGHLPLLVNADGTKLSKRQ-------GDI---------GIQHFRERGY 286
                |.:|....|:   :|.|    |.....:|||:       |.:         .:...|.||:
Mouse   470 LCNALKVYCPVQWE---YGRL----NLHYAVVSKRKILQLVAAGAVRDWDDPRLFTLTALRRRGF 527

  Fly   287 FPQALVNYVVSAGGGFEHRTNAKQQLLSMQALHEQFHIERVNSHPSRLNPELLDDLNRLEIVQRL 351
            .|:|:.|:....|                           |....:.:.|.||            
Mouse   528 PPEAINNFCARVG---------------------------VTVAQTTMEPHLL------------ 553

  Fly   352 SGNESRTKLVNEVQQLVKEAYPQHSNLDLAEEHILDVLNWSSKR-LTLLQDLTSSKLSFLWVKPS 415
                                          |..:.||||.::.| :.:|:.|.....:|...||.
Mouse   554 ------------------------------EACVRDVLNDAAPRAMAVLEPLQVVITNFPAPKPL 588

  Fly   416 DFQIKDLTAEQLA--HLLQLINAI----QDFHKDELNVKLKSFAQKENIKFPLMMKTLRAALSGL 474
            |.::.:..|::..  |.:...:.:    .|| |:|.....|..|..:.:              ||
Mouse   589 DIRVPNFPADETKGFHQVPFASTVFIERSDF-KEESEPGYKRLASGQPV--------------GL 638

  Fly   475 KEGPGVAEMMEIL-GKSVTLERLKEAL--------PKESLH 506
            :....|.|:..|: |.|..:|||:...        ||..:|
Mouse   639 RHTGYVIELQNIVRGSSGCVERLEVTCRRADAGEKPKAFIH 679

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GluRS-mNP_648894.2 gltX 19..500 CDD:234953 112/535 (21%)
GluRS_core 21..349 CDD:173905 81/374 (22%)
Ribosomal_L7_L12 <442..503 CDD:305167 15/69 (22%)
QarsNP_598555.2 GlnS 2..774 CDD:332033 118/561 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0008
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.