DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GluRS-m and ears2

DIOPT Version :9

Sequence 1:NP_648894.2 Gene:GluRS-m / 39828 FlyBaseID:FBgn0036629 Length:511 Species:Drosophila melanogaster
Sequence 2:XP_021331516.1 Gene:ears2 / 751732 ZFINID:ZDB-GENE-060825-214 Length:524 Species:Danio rerio


Alignment Length:484 Identity:215/484 - (44%)
Similarity:296/484 - (61%) Gaps:22/484 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLKINPRMLMQQCLRHAHSQVRVRFAPSPTGYLHLGGLRTALYNFLYARHLGGKFLLRIEDTDQT 65
            ::||...:..|.|.  :..:|||||||||||:||||||||||||||::|...|.|:||:|||||.
Zfish     5 VMKILRGVSRQMCT--SRPEVRVRFAPSPTGFLHLGGLRTALYNFLFSRQRRGVFILRLEDTDQK 67

  Fly    66 RLVPGASERLVEDLLWAGIEIDEGPGFGGQLGPYVQSQRTEIYSKAIEELLHNGTAYRCFCTERR 130
            ||||||:|.:.:.|.||||..||....||..||||||:|..:|::|...||:.|.||.|||:.:|
Zfish    68 RLVPGAAEHIEDMLEWAGIPPDESSRRGGDYGPYVQSERLHLYTEAASSLLNTGHAYYCFCSNQR 132

  Fly   131 LDLLRKEALRTRQVPRYDNKCRHLTTSEVDSLLAKGTPYCIRFKLTDHEEPLDDLIYGKVHHNVS 195
            |:||:|||.|:...|||||:||.|...:|:..||.|.|..:||||....|...||::|...|.|.
Zfish   133 LELLKKEAQRSGHAPRYDNRCRRLQPQQVEQKLAAGVPAVVRFKLHMGTEEFQDLVFGWTGHAVG 197

  Fly   196 DNEGDPVVMKSDQFPTYHFANVVDDHLMGITHVLRGVEWQISTTKHLLLYKAFGWQPPKFGHLPL 260
            ..|||||::|.|.:||||.|:|||||.|.|:|||||.||.||:.|||.||:|..|.||.:.||||
Zfish   198 AVEGDPVILKGDGYPTYHLASVVDDHHMRISHVLRGCEWLISSAKHLQLYRALRWTPPTYAHLPL 262

  Fly   261 LVNADGTKLSKRQGDIGIQHFRERGYFPQALVNYVVSAGGGFEHRTNAKQQLLSMQALHEQFHIE 325
            |:|.||:|||||||||.:|.||:||..|:.|::.|..||.||......::    :..|...|:|.
Zfish   263 LLNRDGSKLSKRQGDIFLQSFRDRGVLPETLLDLVTHAGSGFSDNRMGRR----LDELIRDFNIS 323

  Fly   326 RVNSHPSRLNPELLDDLNRLEIVQRLSGNESRTKLVNEVQQLVKEAYPQHSNLD--LAEEHILDV 388
            ::.:|.:.|:.:.|::.:||.:.:|:...:....|..|::|:||..:....:..  |..|:|..|
Zfish   324 KITTHSALLDLDKLEEFSRLHLQRRIEDPQQCVWLCEELKQMVKHTHSSEISAAAVLEPEYIERV 388

  Fly   389 LNWSSKRLTLLQDLTSSKLSFLWVKP--SDFQIKDLTAEQLAHLLQLINAIQDF--------HKD 443
            |......::.||||.||..|:|||:|  |..|::    .:.||...:..|:...        ..:
Zfish   389 LQLRKGHISSLQDLLSSTHSYLWVRPRVSQTQLQ----SESAHAKDIATAVMQMVLAGGSLVSME 449

  Fly   444 ELNVKLKSFAQKENIKFPLMMKTLRAALS 472
            .||.:||..:.:.|.....:||.||..||
Zfish   450 RLNSELKQISSRTNSTHSSVMKVLRLLLS 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GluRS-mNP_648894.2 gltX 19..500 CDD:234953 211/466 (45%)
GluRS_core 21..349 CDD:173905 173/327 (53%)
Ribosomal_L7_L12 <442..503 CDD:305167 11/31 (35%)
ears2XP_021331516.1 gltX 22..478 CDD:234953 209/463 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170587266
Domainoid 1 1.000 352 1.000 Domainoid score I969
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6907
Inparanoid 1 1.050 418 1.000 Inparanoid score I1781
OMA 1 1.010 - - QHG52070
OrthoDB 1 1.010 - - D309193at33208
OrthoFinder 1 1.000 - - FOG0003395
OrthoInspector 1 1.000 - - oto40602
orthoMCL 1 0.900 - - OOG6_101161
Panther 1 1.100 - - LDO PTHR43311
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1434
SonicParanoid 1 1.000 - - X2748
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1514.940

Return to query results.
Submit another query.