DRSC/TRiP Functional Genomics Resources

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Protein Alignment GluRS-m and eprs1

DIOPT Version :9

Sequence 1:NP_648894.2 Gene:GluRS-m / 39828 FlyBaseID:FBgn0036629 Length:511 Species:Drosophila melanogaster
Sequence 2:XP_009291485.1 Gene:eprs1 / 562037 ZFINID:ZDB-GENE-030131-638 Length:1690 Species:Danio rerio


Alignment Length:560 Identity:116/560 - (20%)
Similarity:209/560 - (37%) Gaps:166/560 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 QVRVRFAPSPTGYLHLGGLRTALYNFLYARHLGGKFLLRIEDTDQTRLVPGASERLVEDLLWAGI 84
            :|.|||.|..:||||:|..:.||.|..|.....||.::|.:||:..:......:.::||:....|
Zfish   196 KVVVRFPPEASGYLHIGHAKAALLNQHYQVTFKGKLIMRFDDTNPEKEKEDFEKVILEDVAMLQI 260

  Fly    85 EIDEGPGFGGQLGPYVQSQRTEIYSKAI----EELLHNGTAYRCFCTERRLDLLRKEALRTRQVP 145
            :.|             |...|..:...|    |:||..|.||        :|....:.::..:..
Zfish   261 KPD-------------QFTYTSDHFPTILRMGEKLLQEGKAY--------IDDTPPDIMKQEREQ 304

  Fly   146 RYDNKCRHLTTSEVDSL---LAKGTPY----CIRFKLTDHEEPLDDLIYGKVHHNVSDNEG---D 200
            |.:::.|:.:..:...:   :.|||.:    |:|.|:                 :::.|.|   |
Zfish   305 RAESRNRNNSVEKNMQMWEEMKKGTEFGQTCCMRAKI-----------------DMNSNNGCLRD 352

  Fly   201 PVVMKSDQ------------FPTYHFANVVDDHLMGITHVLRGVEWQISTTKHLLLYKAFGWQPP 253
            |.:.:...            :|||.||..:.|.:.|:||.||..|:.....:...:.:|.|.:.|
Zfish   353 PALFRCKNAAHPRTGTTYKVYPTYDFACPIVDSIEGVTHALRTTEYHDRDEQFYWVIEALGLRKP 417

  Fly   254 KFGHLPLLVNADGTKLSKRQGDIGIQHFRERGY--------FP------------QALVNYVVSA 298
            .......| |.:.|.||||:    :..|.::||        ||            ..|..::.:.
Zfish   418 YIWEYARL-NLNNTVLSKRK----LTWFVDKGYVDGWDDPRFPTVRGVLRRGMTVDGLKQFIAAQ 477

  Fly   299 GGGFEHRTNAKQQLLSMQALHEQFHIERVNSHPSRLNPELLDDLNRLEIVQRLSGNESRTKL--- 360
            ||.   |:....:...:.|.:::..:    |....::|          :..|.:...|...:   
Zfish   478 GGS---RSVVNMEWDKIWAFNKKLPV----SCKKVIDP----------VAPRFTALLSSQVIPVC 525

  Fly   361 VNEVQQLVKEAYPQH-SNLDLAEEHILDVLNWSSKRLTLLQDLTSSKLSFLWVKPSDFQIKDLTA 424
            |:|.::.:||. |:| .|.|:.                         |..:|..|..| |:...|
Zfish   526 VSEAKETMKEV-PKHPKNADVG-------------------------LKQVWYGPKVF-IEGADA 563

  Fly   425 EQL--AHLLQLIN----AIQDFHKD--------ELNVKLKSFAQKENIKFPLMMKTLRAALSGLK 475
            |..  ..::..||    .|...|:|        :.::.|::...|:..|...:.::.||:..   
Zfish   564 ETFTEGEIVTFINWGNIIITKIHRDSSGAILSLDGHLNLENTDYKKTTKITWLAESSRASFV--- 625

  Fly   476 EGPGVAEMME------ILGKSVTLERLKEALPKESLHLEE 509
              |.|....:      :|||.   :..|:.:.|.| .:||
Zfish   626 --PTVCVNYQHLITKPVLGKD---DDFKDYINKNS-KIEE 659

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GluRS-mNP_648894.2 gltX 19..500 CDD:234953 112/549 (20%)
GluRS_core 21..349 CDD:173905 79/373 (21%)
Ribosomal_L7_L12 <442..503 CDD:305167 12/74 (16%)
eprs1XP_009291485.1 PLN02907 1..717 CDD:215492 116/560 (21%)
GST_C_GluProRS_N 73..153 CDD:198342
tRNA-synt_1c 196..497 CDD:279135 77/346 (22%)
tRNA-synt_1c_C 510..687 CDD:281883 37/186 (20%)
Med25_SD1 716..901 CDD:288132
WEPRS_RNA 762..811 CDD:238473
WHEP-TRS 841..892 CDD:278865
WEPRS_RNA 911..960 CDD:238473
WEPRS_RNA 996..1045 CDD:238473
WHEP-TRS 1080..1132 CDD:278865
PRK08661 1197..1690 CDD:236327
ProRS_core_arch_euk 1201..1464 CDD:238401
ProRS_anticodon_zinc 1470..1690 CDD:238439
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0008
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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