DRSC/TRiP Functional Genomics Resources

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Protein Alignment GluRS-m and GluProRS

DIOPT Version :9

Sequence 1:NP_648894.2 Gene:GluRS-m / 39828 FlyBaseID:FBgn0036629 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_524471.2 Gene:GluProRS / 42834 FlyBaseID:FBgn0005674 Length:1714 Species:Drosophila melanogaster


Alignment Length:321 Identity:78/321 - (24%)
Similarity:124/321 - (38%) Gaps:79/321 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 QVRVRFAPSPTGYLHLGGLRTALYNFLYARHLGGKFLLRIEDTDQTR-------LVPGASERLVE 77
            :|.|||.|..:||||:|..:.||.|..||....|..::|.:||:..:       ::.|..|:|  
  Fly   203 KVVVRFPPEASGYLHIGHAKAALLNQYYALAFQGTLIMRFDDTNPAKETVEFENVILGDLEQL-- 265

  Fly    78 DLLWAGIEIDEGPGFGGQLGPYVQSQRTEIYSKAIE---ELLHNGTAYRCFCTERRLDLLRKEAL 139
                             |:.|.|.:..:..:...::   .|:....||.......::.|.|::  
  Fly   266 -----------------QIKPDVFTHTSNYFDLMLDYCVRLIKESKAYVDDTPPEQMKLEREQ-- 311

  Fly   140 RTRQVPRYDNKCRHLTT-SEVDSLLAKGTPYCIRFKLTDHEEP----LDDLIYGKVHHNVSDNEG 199
            |.....|.::..::|:. .|:.....||..||:|.|: |...|    .|..||.      ..||.
  Fly   312 RVESANRSNSVEKNLSLWEEMVKGSEKGQKYCVRAKI-DMSSPNGCMRDPTIYR------CKNEP 369

  Fly   200 DP-VVMKSDQFPTYHFANVVDDHLMGITHVLRGVE---------WQISTTKHLLLYKAFGWQPPK 254
            .| ...|...:|||.||..:.|.:..:||.||..|         |.|...|   |.|.:.|...:
  Fly   370 HPRTGTKYKVYPTYDFACPIVDAIENVTHTLRTTEYHDRDDQFYWFIDALK---LRKPYIWSYSR 431

  Fly   255 FGHLPLLVNADGTKLSKRQ----GDIG------------IQHFRERGYFPQALVNYVVSAG 299
                   :|...|.||||:    .|.|            ::....||...:.|..::::.|
  Fly   432 -------LNMTNTVLSKRKLTWFVDSGLVDGWDDPRFPTVRGIIRRGMTVEGLKEFIIAQG 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GluRS-mNP_648894.2 gltX 19..500 CDD:234953 78/321 (24%)
GluRS_core 21..349 CDD:173905 78/320 (24%)
Ribosomal_L7_L12 <442..503 CDD:305167
GluProRSNP_524471.2 PLN02907 1..715 CDD:215492 78/321 (24%)
GST_C_GluProRS_N 76..153 CDD:198342
tRNA-synt_1c 203..508 CDD:279135 78/321 (24%)
tRNA-synt_1c_C 510..688 CDD:281883
WHEP-TRS 748..799 CDD:278865
WHEP-TRS 821..870 CDD:278865
WHEP-TRS 894..945 CDD:278865
WEPRS_RNA 973..1022 CDD:238473
WHEP-TRS 1050..1100 CDD:278865
WHEP-TRS 1122..1168 CDD:278865
PRK08661 1220..1714 CDD:236327
ProRS_core_arch_euk 1224..1486 CDD:238401
ProRS_anticodon_zinc 1492..1714 CDD:238439
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45439801
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0008
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.740

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