DRSC/TRiP Functional Genomics Resources

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Protein Alignment GluRS-m and EPRS1

DIOPT Version :9

Sequence 1:NP_648894.2 Gene:GluRS-m / 39828 FlyBaseID:FBgn0036629 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_004437.2 Gene:EPRS1 / 2058 HGNCID:3418 Length:1512 Species:Homo sapiens


Alignment Length:556 Identity:116/556 - (20%)
Similarity:204/556 - (36%) Gaps:166/556 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 QVRVRFAPSPTGYLHLGGLRTALYNFLYARHLGGKFLLRIEDTDQTRLVPGASERLVEDLLWAGI 84
            :|.|||.|..:||||:|..:.||.|..|..:..||.::|.:||:..:......:.::||:....|
Human   197 KVTVRFPPEASGYLHIGHAKAALLNQHYQVNFKGKLIMRFDDTNPEKEKEDFEKVILEDVAMLHI 261

  Fly    85 EIDEGPGFGGQLGPYVQSQRTEIYSKAIEELLHNGTAYRCFCTERRLDLLRKEALRTRQVPRYDN 149
            :.|:..         ..|...|...|..|:|:..|.||        :|....|.::..:..|.|:
Human   262 KPDQFT---------YTSDHFETIMKYAEKLIQEGKAY--------VDDTPAEQMKAEREQRIDS 309

  Fly   150 KCR------HLTTSEVDSLLAKGTPY----CIRFKLTDHEEPLDDLIYGKVHHNVSDNEG---DP 201
            |.|      :|...|.   :.||:.:    |:|.|:                 ::|.|.|   ||
Human   310 KHRKNPIEKNLQMWEE---MKKGSQFGQSCCLRAKI-----------------DMSSNNGCMRDP 354

  Fly   202 VVM------------KSDQFPTYHFANVVDDHLMGITHVLRGVEWQISTTKHLLLYKAFGWQPPK 254
            .:.            |.:.:|||.||..:.|.:.|:||.||..|:.....:...:.:|.|.:.|.
Human   355 TLYRCKIQPHPRTGNKYNVYPTYDFACPIVDSIEGVTHALRTTEYHDRDEQFYWIIEALGIRKPY 419

  Fly   255 FGHLPLLVNADGTKLSKR-------QGDIG---------IQHFRERGYFPQALVNYVVSAGG--- 300
            ......| |.:.|.||||       :|.:.         ::....||...:.|..::.:.|.   
Human   420 IWEYSRL-NLNNTVLSKRKLTWFVNEGLVDGWDDPRFPTVRGVLRRGMTVEGLKQFIAAQGSSRS 483

  Fly   301 ----------GFEHR----------TNAKQQLLSMQALHEQFHIERVNSHPSRLNPELLDDLNRL 345
                      .|..:          ...|::::.:.....|..::.|..||.  |||:  .|..:
Human   484 VVNMEWDKIWAFNKKVIDPVAPRYVALLKKEVIPVNVPEAQEEMKEVAKHPK--NPEV--GLKPV 544

  Fly   346 EIVQR--LSGNESRTKLVNEVQQLVKEAYPQHSNLDLAEEHILDVLNWSSKRLTLLQDLTSSKLS 408
            ....:  :.|.::.|                     .:|..::..:||.:..:|.:.        
Human   545 WYSPKVFIEGADAET---------------------FSEGEMVTFINWGNLNITKIH-------- 580

  Fly   409 FLWVKPSDFQIKDLTAEQLAHLLQLINAIQDFHKDELNVKLKSFAQKEN-IKFPLMMKTLRAALS 472
                |.:|.:|..|.|:     |.|.|  :|:.|   ..|:...|:..: :..|::..|....::
Human   581 ----KNADGKIISLDAK-----LNLEN--KDYKK---TTKVTWLAETTHALPIPVICVTYEHLIT 631

  Fly   473 GLKEGPGVAEMMEILGKSVTLERLKEALPKESLHLE 508
                       ..:|||.   |..|:.:.|.|.|.|
Human   632 -----------KPVLGKD---EDFKQYVNKNSKHEE 653

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GluRS-mNP_648894.2 gltX 19..500 CDD:234953 112/546 (21%)
GluRS_core 21..349 CDD:173905 87/391 (22%)
Ribosomal_L7_L12 <442..503 CDD:305167 10/61 (16%)
EPRS1NP_004437.2 PLN02907 13..711 CDD:215492 116/556 (21%)
GST_C_GluProRS_N 74..157 CDD:198342
Glutamate--tRNA ligase 164..759 116/556 (21%)
tRNA-synt_1c 197..502 CDD:279135 78/342 (23%)
'HIGH' region 204..214 5/9 (56%)
'KMSKS' region 432..436 2/3 (67%)
tRNA-synt_1c_C 504..681 CDD:281883 38/211 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 709..744
WHEP-TRS 753..805 CDD:278865
3 X 57 AA approximate repeats 760..956
WHEP-TRS 826..878 CDD:278865
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 869..900
WEPRS_RNA 904..952 CDD:238473
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 956..1012
Charged 959..991
Proline--tRNA ligase 1007..1512
PRK08661 1019..1512 CDD:236327
ProRS_core_arch_euk 1023..1286 CDD:238401
L-proline binding. /evidence=ECO:0000269|PubMed:24100331, ECO:0007744|PDB:4K87 1121..1123
ProRS_anticodon_zinc 1292..1512 CDD:238439
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0008
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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