DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GluRS-m and ears-2

DIOPT Version :9

Sequence 1:NP_648894.2 Gene:GluRS-m / 39828 FlyBaseID:FBgn0036629 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_499917.2 Gene:ears-2 / 176860 WormBaseID:WBGene00001338 Length:481 Species:Caenorhabditis elegans


Alignment Length:499 Identity:185/499 - (37%)
Similarity:278/499 - (55%) Gaps:56/499 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 VRVRFAPSPTGYLHLGGLRTALYNFLYARHLGGKFLLRIEDTDQTRLVPGASERLVEDLLWAGIE 85
            |||||||||||:||:||||||.:|:|:|:..||.|:|||||||:||.|..|.:::...|.:..:.
 Worm    11 VRVRFAPSPTGHLHIGGLRTAFFNYLFAKKYGGDFILRIEDTDRTRFVDDAQDQIYSSLNFYNLL 75

  Fly    86 IDEGPGFGGQLGPYVQSQRTEIYSKAIEELLHNGTAYRCFCTERRLDLLRKEALRTRQVPRYDNK 150
            .||||..||:.|||.||:|.|||..|...|:.:|.||||||:|.|||||||.|.:..::|:||.|
 Worm    76 PDEGPREGGKFGPYEQSKRLEIYRNAAYRLIDSGHAYRCFCSENRLDLLRKTAEKRGEIPKYDRK 140

  Fly   151 CRHLTTSEVDSLLAKGTPYCIRFKLTDHEEPLDDLIYGKVHHNVSDNEGDPVVMKSDQFPTYHFA 215
            |.:|::.:...:...|..:.|||||........|.::|.|:..:  :|.|||::|||.|||||.|
 Worm   141 CANLSSRDAVKMEQNGEKFVIRFKLDKQNVQFHDEVFGSVNQFI--DESDPVLLKSDGFPTYHLA 203

  Fly   216 NVVDDHLMGITHVLRGVEWQISTTKHLLLYKAFGWQPPKFGHLPLLVNADGTKLSKRQGDIGIQH 280
            ||:||..|.|:||:||:||..||.||.:|||||.|.||||.||.|::.:...|||||..|..:.:
 Worm   204 NVIDDRKMEISHVIRGMEWLSSTGKHTILYKAFNWTPPKFVHLSLIMRSATKKLSKRDKDAFVSY 268

  Fly   281 FRER-GYFPQALVNYVVSAGGGFEHRTNAKQQLLSMQALHEQFHIERVNSHPSRLNPELLDDLNR 344
            :.|: |..|:|::|.::..|.|.  |....:...|:..:.|||.:..:    .|.|  ||.|.:.
 Worm   269 YSEQLGALPEAVLNLMIRNGAGI--RNFDAEHFYSLDEMIEQFDLSLL----GRRN--LLLDSDV 325

  Fly   345 LEIVQRLSGNESRTKLVNEVQQLVKEAYPQHSNLDLAEEHILDVLNWSSKRLTLLQDL------- 402
            |:...|::..:|.          .||.||:          |:|:||..|...|..:|:       
 Worm   326 LQKYSRMAFQKSD----------FKELYPR----------IIDILNKKSNYSTSREDIQKIVTFL 370

  Fly   403 ------------TSSKLSFLWVKPSDFQI--KDLTAEQLAHLLQLINAIQDFHKDELNVKLKSFA 453
                        .|::.|:.:.:|...|:  :......|.::|..:..|:.|:.:    .|:..|
 Worm   371 KAKEENFGFLSSLSTEFSWFFTRPQSSQLLKESHPNVDLRNILNSLLEIEVFNSE----SLEYLA 431

  Fly   454 QKENIKFPLMMKTLRAALSGLKEGPGVAEMMEILGKSVTLERLK 497
            :...:.....|..:|.:|.|.|:||.::|::|..|.:....|::
 Worm   432 KNHQLNLAKAMGIVRISLIGSKKGPPISELVEFFGMTECHRRIR 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GluRS-mNP_648894.2 gltX 19..500 CDD:234953 185/499 (37%)
GluRS_core 21..349 CDD:173905 151/328 (46%)
Ribosomal_L7_L12 <442..503 CDD:305167 13/56 (23%)
ears-2NP_499917.2 gltX 9..475 CDD:234953 185/497 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162627
Domainoid 1 1.000 292 1.000 Domainoid score I820
eggNOG 1 0.900 - - E1_COG0008
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6907
Inparanoid 1 1.050 315 1.000 Inparanoid score I1531
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52070
OrthoDB 1 1.010 - - D309193at33208
OrthoFinder 1 1.000 - - FOG0003395
OrthoInspector 1 1.000 - - oto18274
orthoMCL 1 0.900 - - OOG6_101161
Panther 1 1.100 - - LDO PTHR43311
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1434
SonicParanoid 1 1.000 - - X2748
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.800

Return to query results.
Submit another query.