DRSC/TRiP Functional Genomics Resources

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Protein Alignment TMS1 and MEE55

DIOPT Version :9

Sequence 1:NP_001261947.1 Gene:TMS1 / 39827 FlyBaseID:FBgn0028399 Length:467 Species:Drosophila melanogaster
Sequence 2:NP_001328593.1 Gene:MEE55 / 826965 AraportID:AT4G13345 Length:398 Species:Arabidopsis thaliana


Alignment Length:393 Identity:95/393 - (24%)
Similarity:153/393 - (38%) Gaps:86/393 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 NASSSRFMYAFILLVGTVLGAIALSPGLQDTLKKMPFCINSTSSYSSGALSAV-------SGGSL 91
            |...:|::|..|.|:..:| |.||                  ..|..|||:.:       .||  
plant    29 NPWMARYVYGLIFLLANLL-AWAL------------------RDYGRGALTEMRKFKNCKEGG-- 72

  Fly    92 QVDCEYALGYMAVYRVCFGMACFFALMSLIMLGVKSSRDPRSHIQNNFWPLKFLICFGAAIGAIF 156
              ||   ||...|.||.||...|:.:|.|..:|...:...|....:.:|..|..:..|..|....
plant    73 --DC---LGTEGVLRVSFGCFLFYFIMFLSTVGTSKTHSSRDKWHSGWWFAKLFMLLGLTIFPFL 132

  Fly   157 IPDGSFGPAMMWVGLI---GGLAFILVQLVIIVDFAHSLAENWIESAENSRGYYYALAGVTLLCY 218
            :|..    .:.:.|.|   |...|:|:||:.|:.|...|.|.:....:..|.:.:.:...| ..|
plant   133 LPSS----IIQFYGEIAHFGAGVFLLIQLISIISFITWLNECFQAQKDAERCHVHVMLLAT-TAY 192

  Fly   219 ILSLTGITLLYIYFTTSTGCGINKFFISINLIFCLAISVISILPAVQERLPHSGLLQSSLVTLYT 283
            .:.:.|:.|:||::.....|.:|.|||:..|.....::.||:.|.:     ::|.|..:|:.||.
plant   193 TVCILGVILMYIWYVPEPSCLLNIFFITWTLFLIQLMTSISLHPKI-----NAGFLTPALMGLYV 252

  Fly   284 VYLTWSAVANNPEKE-CNPGMFGMMEGFGNATTTAAPPTHTTRVTFDTTNIIGLVVWLLCILYNC 347
            |::.|.|:.:.|..| ||      .:..|::.|             |...||..||.||.::...
plant   253 VFICWCAIRSEPVGETCN------RKAEGSSRT-------------DWLTIISFVVALLAMVIAT 298

  Fly   348 ISSAVEVSKISHDNSEKREALSDTEAGTDGSGKPSTDTETEGVTYSWSMFHLVFVCASLYVMMTL 412
            .|:.|:.........|..                    |.:.:.|.:..||.||...::|..|.|
plant   299 FSTGVDSQCFQFRKDENH--------------------EEDAIPYGYGFFHFVFATGAMYFAMLL 343

  Fly   413 TNW 415
            ..|
plant   344 VGW 346

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TMS1NP_001261947.1 Serinc 16..417 CDD:281358 95/393 (24%)
MEE55NP_001328593.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2592
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53917
OrthoDB 1 1.010 - - D1276632at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm2609
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10383
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.890

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