DRSC/TRiP Functional Genomics Resources

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Protein Alignment TMS1 and AT2G33205

DIOPT Version :9

Sequence 1:NP_001261947.1 Gene:TMS1 / 39827 FlyBaseID:FBgn0028399 Length:467 Species:Drosophila melanogaster
Sequence 2:NP_001324781.1 Gene:AT2G33205 / 817882 AraportID:AT2G33205 Length:424 Species:Arabidopsis thaliana


Alignment Length:389 Identity:91/389 - (23%)
Similarity:159/389 - (40%) Gaps:83/389 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 SRFMYAFILLVGTVLGAIALSPGLQDTLKKMPFCINSTSSYSSGALSAV----SGGSLQVDCEYA 98
            :|:.|..|.|:                   :..|......|:..||:.:    |.|.....|.:.
plant    49 ARYTYGTIFLI-------------------INLCAWFIRDYAQKALALLPYVSSCGPEGSRCFHT 94

  Fly    99 LGYMAVYRVCFGMACFFALMSLIMLGVKSSRDPRSHIQNNFWPLKFLICFGAAIGAIFIPDGSFG 163
            ||   |.||..|...|:.:|.|.........:.::...::.|..||.:.....:.:.|||     
plant    95 LG---VLRVSLGCFIFYFVMFLSTWNTMKLHEAQNSWHSDNWIFKFFLLVIVMVASFFIP----- 151

  Fly   164 PAMMWVGLIGGLA------FILVQLVIIVDFAHSLAENWIESAENSRGYYYALAGVTLLCYILSL 222
              .:::.:.|.:|      |:.:|||.:::|.......|:...::.:...:.|. ::::.||.|:
plant   152 --QLYIQIYGEIARVGAGIFLGLQLVSVIEFITWWNNYWMPQNQSKQSCSFGLV-MSIVFYIGSV 213

  Fly   223 TGITLLYIYFTTSTGCGINKFFISINLIFCLAISVISILPAVQERLPHSGLLQSSLVTLYTVYLT 287
            .||.::|.::..||.||:|.||||..:|..:.:.|||:...|:.|    |||.|.::..|.|:|.
plant   214 CGIAVMYYFYGASTACGLNIFFISWTVILLIVMMVISLHSKVKNR----GLLSSGIMASYIVFLC 274

  Fly   288 WSAVANNP-EKECNPGMFGMMEGFGNATTTAAPPTHTTRVTFDTTNIIGLVVWLLCILYNCISSA 351
            |||:.:.| ..:||                    .||.....|.|.|:..::.:..|:....|:.
plant   275 WSAIRSEPSHTKCN--------------------AHTQNSHTDWTTILSFLIAIGAIVMATFSTG 319

  Fly   352 VEVSKISHDNSEKREALSDTEAGTDGSGKPSTDTETEGVTYSWSMFHLVFVCASLYVMMTLTNW 415
            :       |:...|......||           .|.:.:.||:..|||||...::|..|...:|
plant   320 I-------DSESFRFEFRKDEA-----------KEEDDIPYSYGFFHLVFSLGAMYFAMLFISW 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TMS1NP_001261947.1 Serinc 16..417 CDD:281358 91/389 (23%)
AT2G33205NP_001324781.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 162 1.000 Domainoid score I1248
eggNOG 1 0.900 - - E1_KOG2592
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 164 1.000 Inparanoid score I1603
OMA 1 1.010 - - QHG53917
OrthoDB 1 1.010 - - D1276632at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm2609
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR10383
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X262
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.940

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