DRSC/TRiP Functional Genomics Resources

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Protein Alignment TMS1 and serinc1

DIOPT Version :9

Sequence 1:NP_001261947.1 Gene:TMS1 / 39827 FlyBaseID:FBgn0028399 Length:467 Species:Drosophila melanogaster
Sequence 2:NP_956021.1 Gene:serinc1 / 325690 ZFINID:ZDB-GENE-030131-4415 Length:459 Species:Danio rerio


Alignment Length:438 Identity:201/438 - (45%)
Similarity:278/438 - (63%) Gaps:31/438 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGAALGICSAAQCAMCCGGTAASMCCSACPSCTNASSSRFMYAFILLVGTVLGAIALSPGLQDTL 65
            |||.||:||.|....|..|:|..:.|..|||..|::.:|.:|||.:|:|..:..|.|.||::..|
Zfish     1 MGAVLGLCSMASWIPCLCGSAPCLLCGCCPSGNNSTVTRLIYAFFMLLGVGIACIMLMPGMEGQL 65

  Fly    66 KKMP-FCINSTSSYSSGALSAVSGGSLQVDCEYALGYMAVYRVCFGMACFFALMSLIMLGVKSSR 129
            ||:| ||       ..|..|::.|....|:|:..:||.||||||||||.||.|.||||:.||||:
Zfish    66 KKIPGFC-------EGGMGSSIPGVEGHVNCDVLVGYKAVYRVCFGMAMFFLLFSLIMVKVKSSQ 123

  Fly   130 DPRSHIQNNFWPLKFLICFGAAIGAIFIPDGSFGPAMMWVGLIGGLAFILVQLVIIVDFAHSLAE 194
            |||:.:.|.||..||.......:||.|||:|.|.....::|:.|...|||:|||:::|||||..|
Zfish   124 DPRAAVHNGFWFFKFAAATAITVGAFFIPEGPFTTVWFYIGMAGAFCFILIQLVLLIDFAHSWNE 188

  Fly   195 NWIESAE--NSRGYYYALAGVTLLCYILSLTGITLLYIYFTTSTGCGINKFFISINLIFCLAISV 257
            :|:|..|  |||.:|.||...|.:.|.|||..:.|.|:|:|.|.||..||.|||||::.|:..||
Zfish   189 SWVEKMEEGNSRCWYAALLSATAINYALSLMSLVLFYVYYTHSDGCTENKVFISINMLLCVGASV 253

  Fly   258 ISILPAVQERLPHSGLLQSSLVTLYTVYLTWSAVANNPEKECNPGMFGMMEGFGNATTTAAPPTH 322
            :||||.:||..|.|||||||:|||||:||||||:.|.|::.|||.:.|:: |. |:|:    |..
Zfish   254 MSILPKIQESQPRSGLLQSSIVTLYTMYLTWSAMTNEPDRRCNPSLLGII-GL-NSTS----PAG 312

  Fly   323 TTRVT--FDTTNIIGLVVWLLCILYNCI--SSAVEVSK--ISHDNS---EKREALSDTEAGTDGS 378
            ..||.  :|...|:||:::|:|:||:.|  ||..:|:|  ::.|.|   |...|..:.|.| ||:
Zfish   313 QDRVVQWWDAQGIVGLILFLMCVLYSSIRNSSNTQVNKLTLTSDESALIEDGPAPENFEVG-DGT 376

  Fly   379 GKPSTDTETEGVTYSWSMFHLVFVCASLYVMMTLTNWYNNFLFPQTSF 426
            .: :.|.|.:|||||:|.||.:...||||:||||||||:    |.:::
Zfish   377 NR-AIDNEKDGVTYSYSFFHFMLFLASLYIMMTLTNWYS----PDSNY 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TMS1NP_001261947.1 Serinc 16..417 CDD:281358 191/412 (46%)
serinc1NP_956021.1 Serinc 17..457 CDD:281358 192/422 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594690
Domainoid 1 1.000 358 1.000 Domainoid score I924
eggNOG 1 0.900 - - E1_KOG2592
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H41334
Inparanoid 1 1.050 377 1.000 Inparanoid score I2044
OMA 1 1.010 - - QHG53917
OrthoDB 1 1.010 - - D1276632at2759
OrthoFinder 1 1.000 - - FOG0000665
OrthoInspector 1 1.000 - - otm25272
orthoMCL 1 0.900 - - OOG6_101085
Panther 1 1.100 - - LDO PTHR10383
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1919
SonicParanoid 1 1.000 - - X262
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1716.800

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