DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAF2 and zmynd10

DIOPT Version :9

Sequence 1:NP_001261943.1 Gene:RAF2 / 39821 FlyBaseID:FBgn0036624 Length:1117 Species:Drosophila melanogaster
Sequence 2:XP_002935679.2 Gene:zmynd10 / 100497840 XenbaseID:XB-GENE-961070 Length:455 Species:Xenopus tropicalis


Alignment Length:476 Identity:95/476 - (19%)
Similarity:155/476 - (32%) Gaps:152/476 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   724 ASSSTTRQKSFVDLNNSDANF----------------HYRVKELFDELNSTMIDKINSVPPDEDS 772
            ||....:|..:::..|..|..                |.::..|..||.|..|.||...|     
 Frog    30 ASGGWFKQHEYIEKLNMQAILNASAGQEEIIKDLLVTHSKISVLIHELISVEIWKIKVFP----- 89

  Fly   773 LKKERERIVADLAALDKLMAQKEDEYNRL---LYL-----SCIKKELHERMERKERLIRIKDLLP 829
                             ::.|.:|...:.   ||:     :.|...|......||.....:||..
 Frog    90 -----------------VLCQLQDFQPKSTFPLYMVIHHEATIINLLETIFYHKEVCESAEDLTL 137

  Fly   830 ILINKCGTK------ELSEVKAMLEEEIDSPMASKHSLSAIEKLLNYAELNQNIIQLLRGSLGLN 888
            .||:.|..|      :.|.:|.:.::.:.|..||:  .|::|:|...||           ||..:
 Frog   138 DLIDYCHRKLTLLASQSSNMKTLSQDRLLSHTASE--ASSLEELKQQAE-----------SLEFD 189

  Fly   889 KRAPSVSPANFEDDQMLFRRDSLPVSHLSMRDQHYESRNAVNDHLLDSNPDRDPPAKRPKLIHSQ 953
            .....:|...:..|    ..||||:              .|.:.||:::   :.|....:|:|..
 Frog   190 IALKCLSVMRYISD----HTDSLPL--------------CVTNRLLNTH---NLPCLLVELLHQC 233

  Fly   954 DSNQDMASSSTHLSA----------NLSETLRKIRAW---------------------------K 981
            ...|...........          .|..|....:||                           |
 Frog   234 PWTQRQKGQLQKYEGGRWYPVPAEDQLKMTKLDGQAWITLYNLLLRPECQQKYNINSFTKGQLLK 298

  Fly   982 NYSHFSNVSMED--NNSDNESQIEPLFNSSPMASRRQLANRQSYQEQHSANINDHENVQKRHKSH 1044
            ..|..:.|.::.  |..:.:..:..|..|.|...:::|...| ..|...:.|.::..   :.|:.
 Frog   299 LRSFLTEVLLDQLPNLVELQRFLSHLSVSEPAPPKKELIIEQ-VPEVWDSIIKENSG---KWKAI 359

  Fly  1045 KRKSHKHKSHKHRSSHKSQAESSA-TIN--------------GNTGRQCHECKLYGATFMCSNCQ 1094
            .::..||.........:|||:..| |.|              |:.|.:        ||..||.||
 Frog   360 AKQQVKHAFSPSEEDLRSQAKRWAQTYNIDVMEALVPEKPKCGSCGSE--------ATKRCSRCQ 416

  Fly  1095 NQWYCSRECQLSDWDTHHRTC 1115
            ::|||.||||:..|..|.:.|
 Frog   417 SEWYCKRECQVKHWQKHKKAC 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAF2NP_001261943.1 zf-MYND 1078..1115 CDD:280009 15/36 (42%)
zmynd10XP_002935679.2 zf-MYND 401..437 CDD:366792 17/43 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 49 1.000 Domainoid score I11697
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005808
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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